| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_5016 |
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| Symbol | |
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| ID | 4246671 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Trichodesmium erythraeum IMS101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008312 |
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| Strand | - |
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| Start bp | 7666501 |
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| End bp | 7668621 |
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| Gene Length | 2121 bp |
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| Protein Length | 706 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 638109825 |
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| Product | glycogen debranching enzyme GlgX |
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| Protein accession | YP_724401 |
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| Protein GI | 113478340 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1523] Type II secretory pathway, pullulanase PulA and related glycosidases |
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| TIGRFAM ID | [TIGR02100] glycogen debranching enzyme GlgX |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTACAAG AGCGTATTGA TATCCATCCT ACCCACAGTC ATGGTGACTT TAAGCTCCGT
AGTGGAAAAC CTTTTCCATT CGGTGCAACT ATGGTGTCTG GAGGAGTAAA CTTTTCCATC
TTCTCTTCTT ATGCTACATC TTGTACATTG GTTTTGTTTC AAAAAGGTGC TTTAAAACCA
ATGGCAGAAA TTCCTTTTCC TGAAGAATTT CGGATAGGGA ATGTTTATTG TATGATTGTC
TTTGATCTTG ATGTTGAGAA CATCGAATAT GGCTATCGCA TGGATGGACC GAATAATTTC
CATGAGGGTC AATGGTTCGA CAAAAGTAAA ATTCTCATGG ACCCCTATGC TAAGATTATT
GGGGGTAGGG ATGTTTGGGG AAAAACACCA AACTGGGATG ATATTTATCA ACACCGGGGG
AGAATTCCCT ATGATGATTT TGACTGGGAA AATGACCGCC CACTAGAAAT TCCACCACAA
GATCAGATTA TCTATGAAAT GCACGTTCGT AGCTTTACGG CTCATCCTTC TTCTGGTGTC
AAACATCCAG GCACATTTGC TGCTATTCGC GAAAAAATTC CTTACCTCAA AGAATTAGGT
GTTAACGCGG TGGAGTTGAT GCCTATCTAT GAATTTGATG AGTTTGAAAA TTCTCGGCCC
AGCCCCATCA CAGGAGAAAT GCTCTACAAT TATTGGGGTT ATAGTACAGT CGGGTTTTTT
GCTCCTAAGG CAGGGTACGC AGCGACAGGT AAGTTAGGAA TGCAGATGGA TGAGTTAAAA
ACTCTAGTTA AAGACCTGCA CAAAAATGGG ATTGAAGTAA TTCTTGACGT TGTTTTCAAC
CACACAGCAG AAGGAAATGA AAACGGTCCG ACAATTTCTT TCCGGGGTAT TGACAATAAG
ACATATTATA TGCTAACACC AGAAGGTTAT TATTTTAACT TTAGTGGTTG TGGCAATACT
ATTAATTGTA ATAACCCCAT TGTTCGTAAT GTGGTGTTAG ATTGTTTGCG CTATTGGGCA
AGTGAATATC ATATTGATGG TTTCAGATTT GATTTGGCTT CAATTCTTGG ACGTGACCCC
TGGGGCGCAC CTTTAGCAAA TCCTCCATTA TTAGAAACTT TGGCTTTTGA CCCAATTTTA
GCTAACTGTA AGTTGATTGC AGAAGCTTGG GATGCTGGTG GTTTATATCA AGTGGGTTCC
TTCCCTGCTT TTGGACGTTG GGCCGAATGG AATGGTAAGT ATCGCGATGC AATTCGCAAG
TTTATTAAAG GTGATTGTAC TGTAGGGGAA ATGGCACAAA GGATACAGGG TTCTCCAGAC
CTCTATGCTT GGCAAGGTCG TGGACCGGCA ACATCTATTA ATTTTATTAC TGCCCACGAT
GGTTTTACTT TGGCTGATTT GGTTTCCTAC AATGATAAGC ATAATGAAGC TAATGGTGAA
AATAATAATG ATGGTGCTAA TGATAACGAA AGTTGGAACT GTGGGGCAGA GGGTTGGAGT
GATGACCCTG GAATAAATGC TTTGCGTAGC CGTCAGATGC GAAATGCGAT CGCAATTATG
ATGGTTAGTC AAGGTGTTCC TATGTTGCTG ATGGGAGATG AAATAGGGCG GAGTAAAAAT
GGTAATAATA ATACTTATTG CCATGACTCA GAACTAAATT GGCTAAATTG GGAGCTTCTG
GAAACTAATG CTGAGTTATT TAGGTTTGTG AAGAATTGTG TGGCATTTCG GAAAGCTCAC
CCTATATTGA AAAATCAGAA CCATTTCCGA AATCAAGATT ATGTAGGTAG TGGAAAATCT
GATATTACTT GGCATGGTAC TCAAGCTTGG AATGCTGACT GGTCAGATAA TTCTCGAACT
TTGGCTTTTA TGCTTTGTGG TAAACATGCT ACAGAGGTGA CAAAGCAAGA TAATGATATT
TATGTAGCAA TGAATATGCA CTGGGACTCT CTCTGGTTTA ACATTCCCGG TTTATCAGAT
GGGAAACATT GGCATATTTT TGTTAATACT GCTTGTGCTT CGCCAGAAGA TGTTTGGGAA
CTTGGGAGCG AACCTGTTTT AGAAAATCAA CATGGGTTAT TACTTGGGGA TCGATCTATA
GTTATTTTAG TAAGTAAATA A
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| Protein sequence | MLQERIDIHP THSHGDFKLR SGKPFPFGAT MVSGGVNFSI FSSYATSCTL VLFQKGALKP
MAEIPFPEEF RIGNVYCMIV FDLDVENIEY GYRMDGPNNF HEGQWFDKSK ILMDPYAKII
GGRDVWGKTP NWDDIYQHRG RIPYDDFDWE NDRPLEIPPQ DQIIYEMHVR SFTAHPSSGV
KHPGTFAAIR EKIPYLKELG VNAVELMPIY EFDEFENSRP SPITGEMLYN YWGYSTVGFF
APKAGYAATG KLGMQMDELK TLVKDLHKNG IEVILDVVFN HTAEGNENGP TISFRGIDNK
TYYMLTPEGY YFNFSGCGNT INCNNPIVRN VVLDCLRYWA SEYHIDGFRF DLASILGRDP
WGAPLANPPL LETLAFDPIL ANCKLIAEAW DAGGLYQVGS FPAFGRWAEW NGKYRDAIRK
FIKGDCTVGE MAQRIQGSPD LYAWQGRGPA TSINFITAHD GFTLADLVSY NDKHNEANGE
NNNDGANDNE SWNCGAEGWS DDPGINALRS RQMRNAIAIM MVSQGVPMLL MGDEIGRSKN
GNNNTYCHDS ELNWLNWELL ETNAELFRFV KNCVAFRKAH PILKNQNHFR NQDYVGSGKS
DITWHGTQAW NADWSDNSRT LAFMLCGKHA TEVTKQDNDI YVAMNMHWDS LWFNIPGLSD
GKHWHIFVNT ACASPEDVWE LGSEPVLENQ HGLLLGDRSI VILVSK
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