| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_4996 |
|---|
| Symbol | |
|---|
| ID | 4246651 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Trichodesmium erythraeum IMS101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008312 |
|---|
| Strand | + |
|---|
| Start bp | 7638584 |
|---|
| End bp | 7639378 |
|---|
| Gene Length | 795 bp |
|---|
| Protein Length | 264 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 638109807 |
|---|
| Product | phosphonate ABC transporter, inner membrane subunit |
|---|
| Protein accession | YP_724383 |
|---|
| Protein GI | 113478322 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG3639] ABC-type phosphate/phosphonate transport system, permease component |
|---|
| TIGRFAM ID | [TIGR01097] phosphonate ABC transporter, permease protein PhnE |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0396446 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTTAATT CGTCATTGAA ATTATTAGAC TTACCACCCG CTCCCAGAAA TTGGGTTCCT
TTGTGGATGA GTCTTGCTGT TTTCCTCATT GGAGTCATGA TTTGGCATCT TGGACTATCT
TTTGGCAGTG TGATCGTAGG TATTGGTAAT ATTTTTGAAT ATCTCAGTCG TTATCTTAAT
CCCGACTTTA CTGATGGGCC AAGATATTTG ATCCTGATGC TACAAACATT AGCGATCGCT
CTTTGGGGTA CAGTATTAGC TTTTCTTACC AGTTTTTTAC TCGCACCTTT GGGAGCAAAC
AATCTCTCAC CACACCCCTT AATTTATCAG CTTATCCGGG AGTTATTCAA CTTTATGCGG
GCAATGCCAG ACTTGATGCT GGCGTTAATT CTGGTTATTA TTCTGGGGCT GGGTCCAACA
CCTGGTATTC TAGCATTAGC AATACATACT TCGGGATTTT TAGGTAAGTT TTTTGCTGAG
AGTATGGAAC GAGTAAATGT AGGTATTTAT GAAGGTTTAC GTTCTACTGG AGCTAATATA
TCTCAAGTTG TTATCTTTGC AGCAGTCCCT TCAATATTGC CAGAGATAGT AGGATATACC
CTTTACATCT TTGATCGAAA TGTCCGAATG GCTTCGGTTT TAGGTTTAGT AGGAGCAGGT
GGTATTGGTT TGGAACTTCA CGATAATTTA CGTTTATTTC GGTACAACCA ATCTGCAGCA
CTGATTTTAG TGATCCTTGT TAGTATTGTG CTTATTGATT ATCTTTCTAG TTGGATACGT
CGGAGAATTA GCTAA
|
|---|
| Protein sequence | MFNSSLKLLD LPPAPRNWVP LWMSLAVFLI GVMIWHLGLS FGSVIVGIGN IFEYLSRYLN
PDFTDGPRYL ILMLQTLAIA LWGTVLAFLT SFLLAPLGAN NLSPHPLIYQ LIRELFNFMR
AMPDLMLALI LVIILGLGPT PGILALAIHT SGFLGKFFAE SMERVNVGIY EGLRSTGANI
SQVVIFAAVP SILPEIVGYT LYIFDRNVRM ASVLGLVGAG GIGLELHDNL RLFRYNQSAA
LILVILVSIV LIDYLSSWIR RRIS
|
|---|
| |