| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_4979 |
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| Symbol | |
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| ID | 4246634 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Trichodesmium erythraeum IMS101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008312 |
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| Strand | - |
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| Start bp | 7604596 |
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| End bp | 7606332 |
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| Gene Length | 1737 bp |
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| Protein Length | 578 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 638109790 |
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| Product | WD-40 repeat-containing protein |
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| Protein accession | YP_724366 |
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| Protein GI | 113478305 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[R] General function prediction only |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
[COG2319] FOG: WD40 repeat |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.363391 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATTTAA AGAAAACAAT TGTCATAATT ATTATTAGCA ACTTACTCAA TATAAACACA
ACCAATATCA GGAATTTTAT TGTTGCTATT ACCATCACTA ATTCACTAAT AACACAAAAA
ATTGCTCTGG GATCAACAGC ATCAGAAATT AATAAAATTG CAGCCGAAAT TACAGTTAGA
ATTGACGGAA GAAACAGAAG TGGCTCAGGA GTAATTGTTG AAAAACAAGG AGACACATAT
TATGTACTCA CCAACTGGCA CGTTGTTAAT ACAGTAGGAG ATTACCAAGT ACGTACACCT
GATGGAAAAA TGCACCCTGT TTACTATACC TTAATCAAGC AATTGCCAAA TATAGACTTA
GCCATCATAC CATTTAGCAG TTCTCAAAAC TACCCCATTG CCGAAACAGG AGACTCCACT
AAATTAGTTT CTGGAACTAA GGTATTTGTG GGGGGATGGC CTCGTTCTGG TAGCAATCTC
AAGCAACGAA TTTTTCTGAG CACCCCAGGA GTGGTGAAAG GTCGTCAGCA ACCTGTTGCT
GGTTATAGTT TACTATATGA TAATTTAGTC AGAGCGGGGA TGAGTGGTGG ACCTGTACTT
AATGAAGAAG GTCGCTTAGT AGCTATTAAT GGTATTGTCA AATTGCAAGA AAACTCTGAT
GTCATTGTCT CAGGAGGGAT TGAAATTAAT ACTTTTTGGG ACTGGCGACA AGGAGTTTCA
TTGCCCATTG TTTCTCAAAT ACCTGAAAAT ATCCAAGCTC CAGCAAGTCC AACAGAAACA
ACAAATCCTG TTGCTACAAA TACTGCTACC AGAGAGGACG ATACTGAAAC TGTCCTGGAC
TTTACTCTCG CAAAAGCAAT TACTGATGAA ATTAGTGGAA TAGTTAATTC AATAGTTGTT
CTAAATGCTT ACATCGTTAT GGGAAGCAGT AATGGTATGA TTTCAGTTTG GGATATCGAG
AATAGAGAAA TTATAGCTAT CTGGAAAGCA CATCCAGAGT CAGTAAACTC AGTTGCAGTA
ACTCCTGATG AACAATTTGT TATTAGTGGA AGTGATGACA AAACTATTAA AATATGGAAA
CTACCTAAAA ATAAAAATAT CAATGATATT AGCTTGGTGC AAACTCTCAC AGGACATACT
GATGTGGTAG ATGGAGTTGC GATCGCTCCC AATAGTAAGA TTTTTGCTAG TGGGAGTTGG
GATGGGACTA TTAAAATTTG GAATTTGGCT AGCGGGGAGT TGCTGCAAAC AATAGCCGGA
CATTCTGAGA TAGTCAATGG GATCGCCATT AGTCCAGATG GGCAATTTTT AGCTAGTGGT
AGCAAGGATA ATCAGATTAA ATTGTGGAAT TTGCAGACAG GACAACTTGT TCGTACTATT
AATACTAATT CTGTTTCAAT TTTGTCTGTA GTTTTTAGTC CTGATAGTCA AATCTTAGCT
AGTAGTAGTA GTAATGGCAC AATTAATATT TGGAACTTAC AGACAGGTAA ATTAATCCAT
AATTTAAAAG AACATTTAGA TGGAGTTTGG TCAATAGTTA TTACTCCTGA TGGAAAAACT
TTAATTAGTG GTAGTTGGGA TAAAACAATC AAATTTTGGG AACTGAGTAC AGGTAAATTA
AAAGGAAGTT TAAGGGGACA CAACAGTTAT ATTAGTGTCG TAGCAATTAG TCCTAATGGG
CAAATCATCG TTAGTGGTGG TTGGGACCGG AAGATTAATA TTTGGAAAGC TCCCTAA
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| Protein sequence | MNLKKTIVII IISNLLNINT TNIRNFIVAI TITNSLITQK IALGSTASEI NKIAAEITVR
IDGRNRSGSG VIVEKQGDTY YVLTNWHVVN TVGDYQVRTP DGKMHPVYYT LIKQLPNIDL
AIIPFSSSQN YPIAETGDST KLVSGTKVFV GGWPRSGSNL KQRIFLSTPG VVKGRQQPVA
GYSLLYDNLV RAGMSGGPVL NEEGRLVAIN GIVKLQENSD VIVSGGIEIN TFWDWRQGVS
LPIVSQIPEN IQAPASPTET TNPVATNTAT REDDTETVLD FTLAKAITDE ISGIVNSIVV
LNAYIVMGSS NGMISVWDIE NREIIAIWKA HPESVNSVAV TPDEQFVISG SDDKTIKIWK
LPKNKNINDI SLVQTLTGHT DVVDGVAIAP NSKIFASGSW DGTIKIWNLA SGELLQTIAG
HSEIVNGIAI SPDGQFLASG SKDNQIKLWN LQTGQLVRTI NTNSVSILSV VFSPDSQILA
SSSSNGTINI WNLQTGKLIH NLKEHLDGVW SIVITPDGKT LISGSWDKTI KFWELSTGKL
KGSLRGHNSY ISVVAISPNG QIIVSGGWDR KINIWKAP
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