Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_4976 |
Symbol | |
ID | 4246631 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | - |
Start bp | 7598976 |
End bp | 7600523 |
Gene Length | 1548 bp |
Protein Length | 515 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 638109787 |
Product | FAD dependent oxidoreductase |
Protein accession | YP_724363 |
Protein GI | 113478302 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1233] Phytoene dehydrogenase and related proteins |
TIGRFAM ID | [TIGR02730] carotene isomerase |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTCAAA CAGATGTAAT TGTAATTGGT AGTGGAATTG GTGGTTTAAG CTGTGCTGCT TTACTAGCGC ACTATGGTTT TGATGTCGTA GTTTGCGAAA GTCATTCTAT TGCTGGAGGT GCTGCTCATA GTTTTGAGCG TCAGGGATTT AAATTTGACT CAGGACCATC TTTACATTCT GGTCTTTCCT ATCGCCCTTC TACTAACCCA CTAGCACAAG TTTTGGATGC TATCGGTGAG TCAGTACCCT GTGTAACTTA TAAGACTTGG GGTTGTTGTT TACCAGAAGG TAACTTTAAT ACATCAGTGG GTGCAGACCA ATTTTGTGAT GTTCTCCAAA AGCTGAGAGG TGAAGGTGCT GTAGCAGAGT GGCGTAAACT ACAAAAAATT ATGGCTCCAC TAGCAGAAGC AGCGATCGCT CTTCCTCCTG CTTCTGTCCG TTTTGACCTA GGAGCAATAA TGACAATGGG GCAATTTCTA CCTACTATGG CAAAGCACAC TTTTAACATT GCTAAGTTAA CGGGAGCGTT TTCCGAAATT CTTGAAGAGG TTGTCACAGA CCCTTTTATC CGAAATTGGT TTGATTTGCT TTGCTTCCTA CTTTCAGGCT TGCCAGCAAA TGGTACCAGT GCTGCTGAAG TTGCATTTAT GTTTGCTGAA TGGTATCGAC CGGGAGTTGT ACTTGACTAT CCTATAGGTG GTAGTGGAGC AATAGTTGAT GCTTTAGTGA GGGGGTTAAA ACGTCATGGC GGTCAACTAA TGTTAAATGC TCATGTGGAA GAGATAGTAA TTAGAGGTGG GCGTGCTGTT GGGGTATTGT TGCAGAATGG AGAGGAAATT CGGGCAAAGC AAGCAGTAGT TTCAAATGCT TCTGTCTGGG ATACTTTGAA ATTACTTTCA GAGGATGCTG TTTCAACATC TTGGCGGGAA GAACGACAAG CAACACCAGA ATGTAATAGT TTTATGCACT TACATTTAGG TATTGATGCT ACAGATATCA AACCAGATCT ATCCTGTCAT CATATTATTG TCAATCATTG GGATCAAATA GATGCGCCCC AAAATGTTGT ATTAGTATCT ATTCCATCCT TAATAGACTC TACTCTTGCA CCCCCAAAAA AGCACGTTAT TCATGTTTAT ACTCCAGGAA ATGAACCATA TCAACTATGG CAGGGTATGG ATAGAAAGAG TCAAGAATAT GCACAACAAA AGCAGGAAAG AGCTGAGGTA ATGTGGCGAG GGTTAGAGAG AATAATACCT GATATTCGTT CCCGTTGTGA AGTTAAATTA GTAGGAACTC CCATAACTCA CGAACGTTTT CTTCGTCGTC ATCGGGGGTC TTATGGTCCG GCAATTCGTG CTGGGGAGGG GTTATTCCCT GGACCTATAG CATTACCGGG GTTATTATGT TGTGGTGACT CTACTTTTCC TGGTATTGGT TTACCTGCAG TGGCAGTAAG TGGGATGATA GCAGCAAATA CTCTTGCTCC TGTATCGAAG CACAGAGAAA TGTTGGAAAG ATTAGTAATA TCAACTCCAG GTAATTAG
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Protein sequence | MSQTDVIVIG SGIGGLSCAA LLAHYGFDVV VCESHSIAGG AAHSFERQGF KFDSGPSLHS GLSYRPSTNP LAQVLDAIGE SVPCVTYKTW GCCLPEGNFN TSVGADQFCD VLQKLRGEGA VAEWRKLQKI MAPLAEAAIA LPPASVRFDL GAIMTMGQFL PTMAKHTFNI AKLTGAFSEI LEEVVTDPFI RNWFDLLCFL LSGLPANGTS AAEVAFMFAE WYRPGVVLDY PIGGSGAIVD ALVRGLKRHG GQLMLNAHVE EIVIRGGRAV GVLLQNGEEI RAKQAVVSNA SVWDTLKLLS EDAVSTSWRE ERQATPECNS FMHLHLGIDA TDIKPDLSCH HIIVNHWDQI DAPQNVVLVS IPSLIDSTLA PPKKHVIHVY TPGNEPYQLW QGMDRKSQEY AQQKQERAEV MWRGLERIIP DIRSRCEVKL VGTPITHERF LRRHRGSYGP AIRAGEGLFP GPIALPGLLC CGDSTFPGIG LPAVAVSGMI AANTLAPVSK HREMLERLVI STPGN
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