Gene Tery_4964 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_4964 
Symbol 
ID4246618 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp7570338 
End bp7571768 
Gene Length1431 bp 
Protein Length476 aa 
Translation table11 
GC content39% 
IMG OID638109775 
Productradical SAM family protein 
Protein accessionYP_724351 
Protein GI113478290 
COG category[C] Energy production and conversion 
COG ID[COG1032] Fe-S oxidoreductase 
TIGRFAM ID[TIGR03471] hopanoid biosynthesis associated radical SAM protein HpnJ 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.576294 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAA CTCTATTTTT AAACCCCCCT TCCTTTGATG GTTTCGATGG AGGAGCCGGA 
GCCAGATATC AAGCCAAACG AGAAATCACC TCATTCTGGT ATCCAACCTG GTTAGCTCAA
CCTGCTGCCC TAGTTCCCGG AAGTAAATTA GTAGATGCTC CTGCTCATTA TCAAACCGTA
GAAGATGTAC TGAAAATTGC TAAAGACTAT GAACTAGTAA TTATGCATAC CAGTACCCCT
TCCCTCCCCA ATGACATTAA ATGTGCAGAA GCAATTAAAA ATCAAAACCC TGAGACAAAA
ATAGGTTTTG TTGGCGCCCA TGTAGCAGTT TTACCAGAAA AAACTCTCAA AGATCATCCA
ATAATTGACT TTGTTTGTCG CAACGAATTT GATTATACCT GTAAAGAATT ATCCCAAGGA
AAACCTTTTG CAAAAATTAA AGGATTGAGT TATTATGATA CCCAAGGTAA TATTCACCAT
ACCCCAGAAC GAGAATTAAT TCATGACTGG GATGCCATGC CCAGTGTTTT TCCAGTTTAT
GCAGAACATC TCAATATTCG TAACTATCTA ATTGGTTATT TACTTAATCC TTATATATCC
TTATATACAG GACGAGGTTG CCCTGCTAAA TGTACTTTTT GTTTGTGGCC ACAAACTATT
GGCGGACATC AATATCGGGC TAAAAGTCCA GAAGCAGTAG GGCGAGAAAT GGCAGAGGCC
AAAGCAATTT GGGGTAGCTC CGTGCGAGAA TACTTTTTTG ATGACGATAC CTTTACCATT
GATAAAAAAC GAGCGATCGC CATTAGCGAA CATTTACAGC GACTGAAGCT AACCTGGAGT
TGTAATGCTC GTGGGAATTT AGATTATAAT ACCCTCAAAG AATTGAAAAA AAACGGACTA
CGTTTGCTAT TAGTCGGTTT TGAATCTGGA AATCAGAAAA TTTTGGATGG AGTCAATAAA
GGAATTAAAT TAGAAGTAGC CCGGAAATTT ATGGAAAATT GCCATAAGTT AGGAATTAAA
GTTCATGGAG CTTTCATTCT CGGTTTACCC AATGAGAGTC AGGAAACTAT TGAGGAGACC
ATCCGTTTTG CTTGTGAAGT CAACCCCCAT ACAATTCAAG TTTCCATTGC TTCCCCCTAT
CCAGGAACAG AATTATATAC TCAAGCAGAG AAAAATGGTT GGTTTACTGG AGACTCTTTA
GTTGCTAGTT CTGGAATTCA AATGTCCGCA TTACAGTACC CTCATTTGTC AGGTAGTGAA
ATTGAAGATG GAGTGGAACA GATGTATCGA CGGTTTTATT TTAGACCCAA GTCTATCATT
CCTATAGTTG GTGAAATGTT AGCAGATCCA CAAATGTTAG TACGTCGTTT ACGGGAAGGC
AAAGAATTTT TGTCTTACCT GAGAGAGCGT CATCAGAGAG CATTGACTTG A
 
Protein sequence
MKKTLFLNPP SFDGFDGGAG ARYQAKREIT SFWYPTWLAQ PAALVPGSKL VDAPAHYQTV 
EDVLKIAKDY ELVIMHTSTP SLPNDIKCAE AIKNQNPETK IGFVGAHVAV LPEKTLKDHP
IIDFVCRNEF DYTCKELSQG KPFAKIKGLS YYDTQGNIHH TPERELIHDW DAMPSVFPVY
AEHLNIRNYL IGYLLNPYIS LYTGRGCPAK CTFCLWPQTI GGHQYRAKSP EAVGREMAEA
KAIWGSSVRE YFFDDDTFTI DKKRAIAISE HLQRLKLTWS CNARGNLDYN TLKELKKNGL
RLLLVGFESG NQKILDGVNK GIKLEVARKF MENCHKLGIK VHGAFILGLP NESQETIEET
IRFACEVNPH TIQVSIASPY PGTELYTQAE KNGWFTGDSL VASSGIQMSA LQYPHLSGSE
IEDGVEQMYR RFYFRPKSII PIVGEMLADP QMLVRRLREG KEFLSYLRER HQRALT