| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_4952 |
|---|
| Symbol | |
|---|
| ID | 4246606 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Trichodesmium erythraeum IMS101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008312 |
|---|
| Strand | + |
|---|
| Start bp | 7544234 |
|---|
| End bp | 7545034 |
|---|
| Gene Length | 801 bp |
|---|
| Protein Length | 266 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 31% |
|---|
| IMG OID | 638109763 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_724339 |
|---|
| Protein GI | 113478278 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1121] ABC-type Mn/Zn transport systems, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAAATTAG TCGAAAGAAA CAAAAGTCTA CCAGTAATTA CTGTACAAAA TTTGACAGTA
ATTATAGGCC AATATAAAGC GGTAGAATCA GTCTCATTTC AAATTTTTTC TGGCAGTAAT
ACAGCAATAA TTGGACCTAA TGGAGCTGGA AAAAGTACAT TAATTCAAGC AATATTAGGT
TTAATTCCTT ATGAGTATGG TTATGTAGAA ATTATTGGCA GAGAAATTAA AAATTTAGGA
AAATATTGGC ATAAAATTGG TTATATTCCC CAGAAGTTAA CTTTTGACCG GAGTTTTCCT
TTAACTGTAA CTGAATTAGT TAGTTTGGGT TGGCCTCAAA GAGGTTTTAT GAAGTCCCAG
GAAAAGCTGA TATCTGTAGA AAAAGCTTTG TTAAAAGTTG GCTTACAAAA TCATCGTAAA
CAGCTCATAG GAAATTTAAG TGGAGGAGAG TTAAAACGGG CTTTATTAGC ATATTGTTTA
GTACAACCTC GCCAGTTATT AATATTAGAT GAAGTGATGG CTGGTGTCGA TCCAAATGGA
GAAGTCGAAT TTGCAGAATT ATTGGCAAAT TTACAAGCAG AAAATGGTTT TTCTATTCTT
CAAGTTTCCC ATGATTTGGA TATGGTAAGC TCTTATTGTG ACCAAGTTAT TTGTATGAAT
CGTCGTTTAT TATGTTGTGG TAAACCTAAT ATTACTTTAG ATAAAGATAA TTTGAGTAAT
ATTTATGGAG ACAATTTAAC TAGATATTTA CATCATCATC AAAAGGAAAG ATTTTTAAAC
AAAACTATAG GTAATTCATA A
|
|---|
| Protein sequence | MKLVERNKSL PVITVQNLTV IIGQYKAVES VSFQIFSGSN TAIIGPNGAG KSTLIQAILG
LIPYEYGYVE IIGREIKNLG KYWHKIGYIP QKLTFDRSFP LTVTELVSLG WPQRGFMKSQ
EKLISVEKAL LKVGLQNHRK QLIGNLSGGE LKRALLAYCL VQPRQLLILD EVMAGVDPNG
EVEFAELLAN LQAENGFSIL QVSHDLDMVS SYCDQVICMN RRLLCCGKPN ITLDKDNLSN
IYGDNLTRYL HHHQKERFLN KTIGNS
|
|---|
| |