Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_4937 |
Symbol | |
ID | 4246591 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | - |
Start bp | 7519815 |
End bp | 7520588 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 638109749 |
Product | two component transcriptional regulator |
Protein accession | YP_724325 |
Protein GI | 113478264 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.565868 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCCGAA TACTCGTCAT TGATGATGAT CCTGCGATCG CAGAACTCGT TGCCGTAAAC TTAGAAATGG CTGGCTATGA AGTTAGTCAA GCAGAAGATG GTATAAAAGG ACAAGCTCTA GCTTTGCAAC TATTACCAGA CCTGATAGTG TTAGATTTAA TGCTGCCGAA AGTAGATGGG TTTACAGTAT GTCAACGTCT GCGTCGTGAT GAACGAACAG CGGATATTCC AGTGTTGATG TTAACTGCTT TGGGTCAAAC CCAAGATAAA GTAGAAGGTT TTAATGCTGG TGCAGATGAT TATTTAACAA AACCCTTTGA AATAGAAGAA ATGCTGGCAC GAGTCCGTGC TTTACTGCGA CGCACAGATC GAATTCCTCA AGCAGCTAAA CATAGTGAAA TACTAAGTTA TGGCCCTTTG ACCCTGGTTC CCGAAAGGTT TGAGGCTATC TGGTTTGATC AAACAGTTAA ATTAACTCAT CTGGAATTTG AGTTACTCCA TTGTTTACTA CAACGCCATG GCCAGACAGT ATCTCCTAGT GAAATTCTTA AGGAAGTCTG GGGTTACGAT CCAGACGATG ATATTGAGAC AATTCGAGTC CATATTAGAC ATCTCAGAAC TAAAATGGAA CCAGATCCTC GTCATCCTCG GTATATTAAA ACCGTATATG GTGCTGGCTA TTGCTTAGAA TTACCTAGTA ATGGGTCCAG TACTAATAAT GAGGAAACAG CTAATTGGTC TCAACCAAAT AGGGATATGG TTAGAGAACC TTAG
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Protein sequence | MPRILVIDDD PAIAELVAVN LEMAGYEVSQ AEDGIKGQAL ALQLLPDLIV LDLMLPKVDG FTVCQRLRRD ERTADIPVLM LTALGQTQDK VEGFNAGADD YLTKPFEIEE MLARVRALLR RTDRIPQAAK HSEILSYGPL TLVPERFEAI WFDQTVKLTH LEFELLHCLL QRHGQTVSPS EILKEVWGYD PDDDIETIRV HIRHLRTKME PDPRHPRYIK TVYGAGYCLE LPSNGSSTNN EETANWSQPN RDMVREP
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