| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_4903 |
|---|
| Symbol | |
|---|
| ID | 4246557 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Trichodesmium erythraeum IMS101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008312 |
|---|
| Strand | + |
|---|
| Start bp | 7489262 |
|---|
| End bp | 7489942 |
|---|
| Gene Length | 681 bp |
|---|
| Protein Length | 226 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 638109724 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_724300 |
|---|
| Protein GI | 113478239 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0325] Predicted enzyme with a TIM-barrel fold |
|---|
| TIGRFAM ID | [TIGR00044] pyridoxal phosphate enzyme, YggS family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.116989 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTTGAGT CAATTGCTGA ACGTATTACC AACATTAAAT CTAATTTACC TAAGTCAGTA
CGGTTAATTG CTGTAACTAA ACAGGTATCA GTTGATACTA TTCGTACTGC CTATGCAGCA
GGAATACGAG ATTTTGGGGA AAATAAAGTT CAAGAAGCAG AAGCAAAGCA AGCTCAACTA
CAAGATTTAC CAGATATTAC CTGGCACTTA ATTGGCCACT TGCAAAGTAA CAAGGTAGTA
AAAGCCTTAA AGCAGTTTCA ATGGATTCAT TCTGTAGACA ATTTGAAACT GGCCAAACGC
CTTAATGCTC TAGCAGAACA GTTTTGTTAT AGTCCCAATA TCTGTCTGCA AGTTAAAATT
TTGCCTGACC CTAACAAATA TGGGTGGACA ATAACAGAAT TAATGAGTGA TTTGGAAGAG
TTAAATCAAT GTCAACATCT GAAAATTAAA GGTTTAATGA CTATTCCACC CCAGGGATTA
GACGATTTAC AAACTCTATC CGTATTTCAG AAAACTAAGG AGTTAGCTCT CGAAATTAGG
GAAAAGAATT TTTCTCACCT AAAAACCCAA GAGCTTTCAA TGGGAATGTC AGAAGATTAT
AATTTAGCTA TATCTGCCGG TACTACTATT GTGAGACTAG GTAGAATTTT ATTTGGCGAA
AGAAAGAATA AAAAAGACTG A
|
|---|
| Protein sequence | MVESIAERIT NIKSNLPKSV RLIAVTKQVS VDTIRTAYAA GIRDFGENKV QEAEAKQAQL
QDLPDITWHL IGHLQSNKVV KALKQFQWIH SVDNLKLAKR LNALAEQFCY SPNICLQVKI
LPDPNKYGWT ITELMSDLEE LNQCQHLKIK GLMTIPPQGL DDLQTLSVFQ KTKELALEIR
EKNFSHLKTQ ELSMGMSEDY NLAISAGTTI VRLGRILFGE RKNKKD
|
|---|
| |