Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_4895 |
Symbol | |
ID | 4246549 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | - |
Start bp | 7475785 |
End bp | 7477173 |
Gene Length | 1389 bp |
Protein Length | 462 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 638109717 |
Product | 3-phosphoshikimate 1-carboxyvinyltransferase |
Protein accession | YP_724293 |
Protein GI | 113478232 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0128] 5-enolpyruvylshikimate-3-phosphate synthase |
TIGRFAM ID | [TIGR01356] 3-phosphoshikimate 1-carboxyvinyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGTGG CGTTAGTAAA GGTTGATTTT ATGGTAGCTA CTGTAGTTAG TACAAAAATT ACAAATAGTC AGGAAACTTT GATAATTCAA AACCCAAAGT TAGGTTTATC TCTTTGCGGT AATATTTCAA TTCCTGGAGA TAAATCAATT TCTCATCGCG CTTTGATGTT AGGAGCAATA GCTCAAGGCC AAACTAATAT TCAAGGTTTA CTCTTAGGAG CTGATCCCTA CAGTACTGCT GGATGTTTTT CACTTCTTGG GGCGAATATT TCCCAACTTA ATTCGGAGTT TGTACAAGTT GATGGAGTGG GTCTTTTAAA TCTTACAGAA CCATCTTGCG TTTTGGACTG TGGTAATTCA GGCACTACAA TGCGACTAAT GTTGGGAATT TTAGCATCCC ATCCTGAACA TTTCTTTACT GTGACAGGGG ATAGCTCCTT AGTACAACGT CCAATGTCTC GTGTTATTCA GCCACTCACA GAAATGGGGG CTCAAATCTG GGGTAGAAAA GGAAACAGCT TGGCACCTTT AGCAATTCAG GGACAAAAGT TACGACCAAT TCATTATTAT TCTCCCATTG CTTCAGCTCA GGTGAAATCT TGTATTTTGT TAGCTGGTTT AATGGCAGAA GGGAAAACTA CGATAACTGA ACCTGCTCTT TCACGAGACC ATAGTGAAAG AATGTTAAAA GCTTTTGGAG CAGAAATTCA AGTGGACCCA GAAACAAATA GTGTGACGGT AACAGGTCCG GCTCAACTTA AAGGCCAAGA TGTAGTTGTG CCTGGTGATA TTAGCTCCGC AGCTTTTTGG TTAGTAGCAG CAGCTATTGT ACCTGGCTCA GAATTAGTAA TTGAAAATGT TGGTGTTAAT TCTACCCGTA CAGGTATTTT GGAAGTATTA GAAAGAATGG AAGTAGATAT TAGACAGGAA AATCACCGAG TTGTAGCAGG AGAACCTGTA GCAGATTTAC GGGTATGTTA CAGTTCATTA AAAGCTTGCG AAATTTCTGG TTCTATTATT CCCAGATTAA TTGATGAAAT TCCAATTTTG GCCGTAGCTG CTATGTTTGC TGAAGGGACA ACAGTGATTC GGGATGCTGC TGAGTTGCGG GTCAAAGAAA GCGATCGCCT AGCAGTTATG GCCACCCAGC TCCAAAAACT GGGGGCTAAA ATTATAGAAC TACCAGATGG TTTGGAAATT ACTGGTGGTG TTTCTATAAC TGGTACAGAT GTTGAGAGCA ATGGGGATCA TCGAGTAGCA ATGAGTTTAG CGATCGCTGC ATTGAATGCT ACTGGCATTA CTAATATCCA TCATGCTGAA ACTGTCAATA TCTCTTATCC CAGCTTTGTT CAAACTCTAC AACAAGTCTG TACTTCAAAC ATAAATTAG
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Protein sequence | MAVALVKVDF MVATVVSTKI TNSQETLIIQ NPKLGLSLCG NISIPGDKSI SHRALMLGAI AQGQTNIQGL LLGADPYSTA GCFSLLGANI SQLNSEFVQV DGVGLLNLTE PSCVLDCGNS GTTMRLMLGI LASHPEHFFT VTGDSSLVQR PMSRVIQPLT EMGAQIWGRK GNSLAPLAIQ GQKLRPIHYY SPIASAQVKS CILLAGLMAE GKTTITEPAL SRDHSERMLK AFGAEIQVDP ETNSVTVTGP AQLKGQDVVV PGDISSAAFW LVAAAIVPGS ELVIENVGVN STRTGILEVL ERMEVDIRQE NHRVVAGEPV ADLRVCYSSL KACEISGSII PRLIDEIPIL AVAAMFAEGT TVIRDAAELR VKESDRLAVM ATQLQKLGAK IIELPDGLEI TGGVSITGTD VESNGDHRVA MSLAIAALNA TGITNIHHAE TVNISYPSFV QTLQQVCTSN IN
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