| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_4806 |
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| Symbol | alaS |
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| ID | 4246460 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Trichodesmium erythraeum IMS101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008312 |
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| Strand | - |
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| Start bp | 7388112 |
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| End bp | 7390736 |
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| Gene Length | 2625 bp |
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| Protein Length | 874 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638109653 |
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| Product | alanyl-tRNA synthetase |
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| Protein accession | YP_724229 |
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| Protein GI | 113478168 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0013] Alanyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00344] alanine--tRNA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00251805 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGCAA AAAAACTAAC AGGTAACGAA ATCAGAAAAA AGTTTCTCAG CTTTTACGCA
CAAAGGGAAC ACACCATTTT ACCAAGTGCA TCTCTAGTTC CCGAAGACCC TACGGTCTTA
CTAACTATTG CGGGAATGCT ACCATTTAAA CCCATATTTC TTGGACAACA ACCCCGACAA
TATCCCCGCG CCACTACATC CCAAAAATGT ATCCGTACTA ATGATATTGA AAATGTTGGT
CGCACTGCCA GACACCACAC TTTTTTTGAG ATGTTAGGTA ACTTCAGTTT TGGCGACTAT
TTTAAACCAG AAGCGATCGC TTTGGCTTGG GAGCTTTCCA CAAAAATATT TGCTTTACCA
CCAGAGCGTT TAGTTGTCAG TGTATTCCGA GAAGATGATG AAGCTTTTGC AATTTGGCGC
GACCAAATAG GTATTCCAGC ACATCGTATT CAACGGATGG ATGAGGCAGA TAATTTTTGG
GCATCAGGTC CAACGGGTCC ATGCGGTCCA TGTTCAGAAA TTTATTATGA TTTTCACCCA
GAATTAGGGG ATGATCACAT TGACTTGGAA GATGACACTA GGTTTATTGA GTTTTATAAC
CTAGTATTTA TGCAATATAA CCGTGATGCT AACGGAAATC TCACCCCGCT AGAAAACAGA
AATATTGATA CGGGGATGGG GTTGGAAAGG ATGGCGCAAA TCTTACAAAA AGTTCCTAAT
AATTATGAAA CTGACCTGAT TTTTCCCATC ATTAAAACGG CTAGTGATAT TGCTGATATT
GACTATAGAA AAAGTGACGA TAAAACCAAA GTTTCTCTTA AAGTCATTGG TGATCATGTG
CGAGCAGTAG CAAATTTAAT TGCTGATGGT GTCACCGCAT CTAATGTCGG TAGGGGTTAT
ATTTTACGAC GGTTAATTCG GCGAGTTGTT CGTCATGGTC GTTTGATTGG AATTTCTGGG
GAATTTACAT CAAAAGTTGC TGAAACAGCA ATCACTCTGG CTGAGGATAT TTACCCAAAT
CTTCGAGAAC GAGAAACTGT GATTAAAGCA GAGTTACAAC GGGAAGAGTC TCGCTTCCTT
GAAACATTGG AGCGAGGAGA AAAACTATTG GCAGAAATTA TGGCCAAACC CGAAACCAAG
AAAACTCAGC ATATTTCTGG AGAAGATGCT TTCAAGTTAT ACGATACCTA TGGCTTTCCC
TTAGAGCTGA CTCAAGAAAT AGCTGAGGAA AATGGTTTAA CTGTTGATGT CAGTATGTTT
GATCAAGAAA TGAAACTAGC CCAAATACGC TCTCAGTCAG CACATGAAAC TATTGACTTG
ACAGCTCAAG ATGGGGTAAA ATTAGATATA GACAAAACGC AGTTTTTAGG ATACACAGAT
TTGAGTTCTC CAGCACAGGT AATGGCTTTG GTAGGAGATG GTGAACAATT GGAGACGGTT
CAAGCAGGTG CTCAAGTGCA AATTGTACTT GACAAAACGC CTTTTTATGC TGAGTCTGGA
GGACAAATAG CCGATCGTGG TTATCTCAGT GGGGATAGTT TGGTAGTACG AATAGAAGAC
GTGCAAAAGC AGAATAATAT TTTTGTACAT TTTGGTCGTA TTGAGCGAGG TAGGTTACAG
TTAGGAATGA CGGTGAATGC TCAAATAGAT GGTACTTGTC GACGTCGAGC ACAGGCAAAT
CATACAGCGA CTCATCTATT ACAAGCTGCT TTGCGCTCTC TTGTAGACTC GTCAATTTCT
CAGGCGGGTT CTTTGGTATC TTTTGACCGT TTACGATTTG ATTTTAATTG CCCAAGGGGT
TTGAAACCGG AGGAAGTCGA GCAAGTAGAA GCTCAAGTCA ATAGTTGGAT AGCTGAAGCA
CATTCGGCGA CGGTTGCCGA AATGCCATTG GAAGTAGCTA AAGCAAAGGG AGCAGTTGCT
ATGTTTGGAG AAAAATATGC TGATGTGGTG CGGGTGGTTG ACTATCCGGG AGTATCGATG
GAATTATGTG GGGGAACTCA TGTGAATAAT ACTGCAGAAA TTGGCGTGTT TAAAATTATT
TCTGAAGCTG GTATTTCTTC TGGAGTACGC CGTATTGAAG CAGTGGCAGG TTTAGCAGTT
TTAGATTATT TGAAGGTGCG GGATGCTGTG GTTAAAGAAT TGAGCGATCG CTTTAAGGCA
AAACCGGAGG AGCTATCGGA GCGTGTGAGT AACTTGCAGC AGGAGTTGAA GGACTCGCAG
AAACAGTTGG AAGCATTGAA AGGGGAGTTA GCAGTAGCGA AGTCTGACCA GTTGTTGGGG
AATGCTGAGA CTGTCGGTGA GTTTCAGATA TTGGTAGCAG AAATGCCTGG AGTTGATGCG
GAGGCGTTGA AGACAGCAGC AGAGAGGTTG CAACAAAAGT TAGATGAAAG TGCTGTGGTA
TTAGGTTCTG CAGCTGAGGG TAAAGTTAGT TTAGTTGCTG CTTTTAGTAA ATCTGTAAAT
GGTAAAGGTT TGCAAGCAGG AAAATTTATT GGCGGGATAG CGAAAATTTG TGGAGGAGGC
GGTGGCGGCC GTCCGAACTT GGCGCAAGCA GGGGGTCGCG ATCCGAGTAA GTTGAAGGAG
GCATTGGAGA GTGCGAAGGA GCAGTTGGTT GATGGGTTGA AGTAA
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| Protein sequence | MSAKKLTGNE IRKKFLSFYA QREHTILPSA SLVPEDPTVL LTIAGMLPFK PIFLGQQPRQ
YPRATTSQKC IRTNDIENVG RTARHHTFFE MLGNFSFGDY FKPEAIALAW ELSTKIFALP
PERLVVSVFR EDDEAFAIWR DQIGIPAHRI QRMDEADNFW ASGPTGPCGP CSEIYYDFHP
ELGDDHIDLE DDTRFIEFYN LVFMQYNRDA NGNLTPLENR NIDTGMGLER MAQILQKVPN
NYETDLIFPI IKTASDIADI DYRKSDDKTK VSLKVIGDHV RAVANLIADG VTASNVGRGY
ILRRLIRRVV RHGRLIGISG EFTSKVAETA ITLAEDIYPN LRERETVIKA ELQREESRFL
ETLERGEKLL AEIMAKPETK KTQHISGEDA FKLYDTYGFP LELTQEIAEE NGLTVDVSMF
DQEMKLAQIR SQSAHETIDL TAQDGVKLDI DKTQFLGYTD LSSPAQVMAL VGDGEQLETV
QAGAQVQIVL DKTPFYAESG GQIADRGYLS GDSLVVRIED VQKQNNIFVH FGRIERGRLQ
LGMTVNAQID GTCRRRAQAN HTATHLLQAA LRSLVDSSIS QAGSLVSFDR LRFDFNCPRG
LKPEEVEQVE AQVNSWIAEA HSATVAEMPL EVAKAKGAVA MFGEKYADVV RVVDYPGVSM
ELCGGTHVNN TAEIGVFKII SEAGISSGVR RIEAVAGLAV LDYLKVRDAV VKELSDRFKA
KPEELSERVS NLQQELKDSQ KQLEALKGEL AVAKSDQLLG NAETVGEFQI LVAEMPGVDA
EALKTAAERL QQKLDESAVV LGSAAEGKVS LVAAFSKSVN GKGLQAGKFI GGIAKICGGG
GGGRPNLAQA GGRDPSKLKE ALESAKEQLV DGLK
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