| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_4802 |
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| Symbol | |
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| ID | 4246456 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Trichodesmium erythraeum IMS101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008312 |
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| Strand | + |
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| Start bp | 7381867 |
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| End bp | 7383324 |
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| Gene Length | 1458 bp |
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| Protein Length | 485 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 638109649 |
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| Product | 23S rRNA (uracil-5-)-methyltransferase RumA |
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| Protein accession | YP_724225 |
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| Protein GI | 113478164 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG2265] SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase |
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| TIGRFAM ID | [TIGR00479] 23S rRNA (uracil-5-)-methyltransferase RumA |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.810738 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGTCACAT CATTTTGGCA ACAAGGTCAG CTAGTAGAAA TAACTATCAC GGATTTAACA
GATAGTGGTG ATGGAGTGGG TCGTTATGAT GAAAAAGTGG TATTTGTGCC TAATACAGTT
TCTGGCGATC GTCTACTTGC CCGCCTGACA AGAGTCAAAC CTAAATATGC CTATGGGAAA
ATGCATCAAC TTTTAGAAGG GTCTGAACAA CGGATAAAAC CTTACTGTAT TGTAGCGGAT
AAGTGTGGTG GTTGTCAATG GCAACATGTT GGTTATGAAT ATCAGCTTCA AGCAAAACAA
AATCAAGTTA TTCAAGCTTT AGAAAGAATA GGAGGGCTAA AATTACCAGA AGTTGACCCT
ACTTTGGCAT CTGTATCAAC TTTTGGATAT CGCAACAAAG TTACATATCC TTTGAGTATT
TCTAATGAAG GTGAGGTGAA AGCAGGTTAT TATCAAAAGG GTAGCCATAA GTTGATTAAT
CTAAATCAAT GTCCGATTCA AGACCAACGT TTTAACCCTT TGCTAAAAGA GATAAAACAG
GATATTACTA GGCGAAAATG GAAAATATAT GATGAACATA AACGTATAGG TATTTTACGT
CATTTATCTT TGAAAATAGG GGAAAAAACA GGGGAAATTA TATTAACTTT GGTGGTTAAT
GGTAGTGAGG AAAATCCAGA AAAGTTATTA CCTGGCATTA CAGTTCAAGC CCAGAAATGG
TTGGAAGATT ATTCTCGGTT AGTGGGTGTT TGTTTAAACT ATAATTCAAA GGCAACAAAT
ACTATTTTTG GTCAACAAAC TGTTTGTGTT GCTGGTAGGT TTTATGTGCG GGAAAAGTTT
AGTGGTTTAG AATTTCAATT GACTCCTAAT ACTTTTTTTC AGGTAAATAC AAAGACTACT
GAAAAGTTAG TAGAAATAGT TATTCAAGAG TTGGCTTTGA GTAACTCTGA GATTATTGTT
GATGCTTATT GTGGAGTAGG TACTTTCTGT TTATCTCTGG CAAAATATTT ACAGCAAGTT
GATATTAACT ATAATGAATC TCTGAATATA GTGACAGAAG ATTTATCAGA AATAAAATTG
AGAAAAAGTA TGGTCATTGG TTTAGAAGTG CAAGGAGTGG CCATTGAGCA GGCTAAGTTT
AATGCTAAAA TTAATCACTT GACAAATGTA CACTTTTATG AAGGAAAAGT TGAGCGTTTG
TTGCCTCAAT TGGAGGTCAA ACCAGATATA GTTTTGTTAG ACCCACCAAG GAAAGGTTGC
GATCGCTCTG TTTTAGAGAC TTTGCTGGAA ATTCTACCTG AGCGAATTGT ATATATTAGC
TGTAAACCTG CTACTTTGGC TCGTGATTTA AAATTTCTCT GTTCAACTGG TAAATATTGT
TTGAACAAGG TACAACCTGT AGATTTTTTT CCTCAAACTG CCCATGTTGA GTGTGCTGCA
TTTCTAATAA AGCTGTAA
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| Protein sequence | MVTSFWQQGQ LVEITITDLT DSGDGVGRYD EKVVFVPNTV SGDRLLARLT RVKPKYAYGK
MHQLLEGSEQ RIKPYCIVAD KCGGCQWQHV GYEYQLQAKQ NQVIQALERI GGLKLPEVDP
TLASVSTFGY RNKVTYPLSI SNEGEVKAGY YQKGSHKLIN LNQCPIQDQR FNPLLKEIKQ
DITRRKWKIY DEHKRIGILR HLSLKIGEKT GEIILTLVVN GSEENPEKLL PGITVQAQKW
LEDYSRLVGV CLNYNSKATN TIFGQQTVCV AGRFYVREKF SGLEFQLTPN TFFQVNTKTT
EKLVEIVIQE LALSNSEIIV DAYCGVGTFC LSLAKYLQQV DINYNESLNI VTEDLSEIKL
RKSMVIGLEV QGVAIEQAKF NAKINHLTNV HFYEGKVERL LPQLEVKPDI VLLDPPRKGC
DRSVLETLLE ILPERIVYIS CKPATLARDL KFLCSTGKYC LNKVQPVDFF PQTAHVECAA
FLIKL
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