| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_4672 |
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| Symbol | |
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| ID | 4246326 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Trichodesmium erythraeum IMS101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008312 |
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| Strand | - |
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| Start bp | 7186213 |
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| End bp | 7187502 |
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| Gene Length | 1290 bp |
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| Protein Length | 429 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638109537 |
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| Product | twitching motility protein |
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| Protein accession | YP_724113 |
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| Protein GI | 113478052 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2805] Tfp pilus assembly protein, pilus retraction ATPase PilT |
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| TIGRFAM ID | [TIGR01420] pilus retraction protein PilT |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.304858 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACACAAA CACCGCCACC TCCTCCCCCT ACATCACGAT CAGGAAGCCG TGATCTAACA
TATCGTCCCC CAGCTCCACC ACCTCCAAGA GTAAAAAAAC AATCAGCAGT TTCTCTAAAA
CCTTCCAATT CTTCACCAGC ATCACCTCCA AGTTCTAGGG AAATCATTCC TCAAAAGGAA
ACTGTACCAA AGCAACGAGC AACTCCTCTA AGTCCAGAAC TTGCACCTGG ACAAGTAAGA
TTGACAGAAA TTGTCCGGCG GGCTGAAAAA GAGGGAATTT CAGATATTCA CTTGGGTGTA
AATGAAATAC CAAGATTTCG CAAGCGTGGT GACCTCATAC CAATTGAGTA TCCAGAGACT
GACTTAGGCA CTTTTATGAG TTGGCTGCGA GAAATTCTCA AAGATGAAGA AATTCGCGTC
TTTCAGGAAA ATTTAGACTT TGACGGTGCC GCTGACCTAG GTTTTGTCCG AATACGGATT
AGCTTGTTTG ATTCTCTTGC CGGCCCGGCC ATGGTCTTAA GACTTATTGG TGCAACAATT
CTCAAGATGG ATCAACTCAG GCTGCCAGAA GTTTTTAAGA AAGTTTGCCA CTACCATAAA
GGATTACTTT TGGTAACAGG ACCAACAGGT TCTGGTAAAT CTACTACCAT GGCAGCCATG
ATTGATTATA TGAATGATAC TTTTCCTTAT CACATCATAA CTGTTGAAGA CCCTGTAGAA
TTTGTCCACG AAAGTCGGAA ATCTTTGATC AAGCACCGAG AAGTAGGTAG ACATACTCTG
AAATTCTTCA ATGCCCTTAA AGGTGCTCTT CGTCAAGATC CTGACCTGAT GCTAGTTGGA
GAAATTCGGG ATAAGGAAAC CGTAGGAATA GCCATTAAGG CAGCATCTAC AGGACACTTG
GTGATGGGAA CTTTGCACAC TAACAGTGCA GTTAAAACTA TAACTCGTAT TCTGGATATG
TTTTCTGCTG AAGAACAACC AGCAATTAAA TTAGCTCTTT CAGAAATTCT GGTAGCGATT
ATTGCTCAGT TGTTGTGTAA AACTACTGAT GGTAAACGAG CAGCTTTCCA TGACATTTTG
ATTAATACTG ATGTAGTGAA AGAGTATATT CTCAAAGACC AGTATGAAGA CATTCAGCAG
ATCATGCTTA AAGATACTTA TGAAGGCATG ACTACTATGA ACAGGTCTTT GTATGATCTT
TATCGAGATG GTAGAATCAC TGAAGAGATA GCAATAAATC AGTCACCTTC CCCAAACGAA
ATGTCTCAAA TGCTACGCGG CAGAATTTAA
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| Protein sequence | MTQTPPPPPP TSRSGSRDLT YRPPAPPPPR VKKQSAVSLK PSNSSPASPP SSREIIPQKE
TVPKQRATPL SPELAPGQVR LTEIVRRAEK EGISDIHLGV NEIPRFRKRG DLIPIEYPET
DLGTFMSWLR EILKDEEIRV FQENLDFDGA ADLGFVRIRI SLFDSLAGPA MVLRLIGATI
LKMDQLRLPE VFKKVCHYHK GLLLVTGPTG SGKSTTMAAM IDYMNDTFPY HIITVEDPVE
FVHESRKSLI KHREVGRHTL KFFNALKGAL RQDPDLMLVG EIRDKETVGI AIKAASTGHL
VMGTLHTNSA VKTITRILDM FSAEEQPAIK LALSEILVAI IAQLLCKTTD GKRAAFHDIL
INTDVVKEYI LKDQYEDIQQ IMLKDTYEGM TTMNRSLYDL YRDGRITEEI AINQSPSPNE
MSQMLRGRI
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