Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_4481 |
Symbol | glyS |
ID | 4246134 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | + |
Start bp | 6918044 |
End bp | 6920203 |
Gene Length | 2160 bp |
Protein Length | 719 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 638109364 |
Product | glycyl-tRNA synthetase subunit beta |
Protein accession | YP_723941 |
Protein GI | 113477880 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0751] Glycyl-tRNA synthetase, beta subunit |
TIGRFAM ID | [TIGR00211] glycyl-tRNA synthetase, tetrameric type, beta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.731924 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0858499 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATAGTAA CGTTTTTATT AGAAATTGGT ACAGAAGAAT TACCGGCAAA TTTTGTCTAT GAAGCCATAC AACAGTGGCA AGAACTTATC CCGATGACCC TCAAAGAAGC ATTCCTGACA AATGATTCAG TTAATGTGTA CGCTACACCT AGGCGTTTAG CAGTGGTAAT TGACGCTTTG CCAACTAAAC AACCAGACCG AGAAGAAGAA ATTAAAGGAC CTCCGGCTAA GGCGGCTTTT AAAGATGGTA AACCTACTAA AGCGGCAGAA GGATTTAGTA AAAAACAAGG AGTACAACTT AATGATCTAC AAATATGTAC TACAGAAAAA GGTGATTTTG TTTTCGTAAA TAAAAAAATT CAGGGTAAAC CAACAGCAGC AATTCTGACA GAATTAATAC CAAAATGGAT CGATAAACTA GAAGGTAAAA GATTTATGCG TTGGGCAGAT GGAGAACTTA AATTTCCCCG CCCTATTAGA TGGTTAGTAG CATTGTTAGA TGATGAAATC TTGCCGATAA ATTTAGATAA TGGTTCGCAG AAAATTACAA GCGATCGCTT CTCTTATGGT CATAGAGTTT TGCATCCTAA ATTAATAGAA ATTTCTCAAG CAAAAAATTA TGTGGAAGTA TTGAAAAAAG CCTACATTGA AGTAGACTAT AAACAAAGAA AAAGCAAAAT TGAACAACAA ATAAAAACTG CAGCTGAAGA AATTAAAGGA AAAGCAGAAA TTTCGGAAGA ATTATTAGCA GAAGTCACAA ATTTAGTAGA ATGGCCAACA GTAGTAATTG GAAAGTTTGA TGAAGAATTT TTAATTTTAC CTGGGGAAGT AACAACAACA GTAATGGAGA CACATCAACG TTACTTTCCT GTTTTCAAAT CTACAAAAAC TTTTAAAGAC ATGGAGTTGT TGCCATATTT TATTACCATT TCTAATGGCG ACCCAGAAAA ATCAGAAATT ATTGCTATAG GGAACGAAAG AGTAATTAAA GCGAGATTAG CAGACGGACA ATTTTTCTAT AAAACAGATT TAGCTAAACC ATTAGAAAGC TATTTGCCTG AATTAGAAAC AGTTACATTC CAAGCCAAAT TAGGCTCAAT GAGAGAAAAA GTTAAACGTA TTGTTAGTAT AGCTAAGTTA ATTGCTGGAC AGTTACAAAT AACTCAAGAA GAATCCAAAA ATATAGAAAG AGCAGCTCTT CTTTGCAAAG CTGACTTAGT AACTCAAATG GTTTATGAAT TTCCTGAATT ACAAGGAGTA ATGGGAGAAA AATATGCTCG CGCTGCTGGA GAAACTGAAG CAGTGGCAAC TGCAATTTTT GAACATTATT TACCTAGAGG TGCCGGGGAT ATTTTACCCA AAACTATTAG TGGTCAAGTT ATAAGTTTGG CAGATAGACT TGATACTTTG GTAAGTATTT TTGGATTAGG AATGTTACCT ACAGGTTCCG CGGATCCTTT TGCTTTACGT CGGGCTGCAA ATGGGGTGGT TAATATTAGT TGGTCAGCTA ATTTGCCATT AAATTTACAT CAGTTATTAG AAGAAATTGC TACAAATTTT TTCAAAACTT ATTCCCAAAC AAACTCAGAT TTATTAGCAC AGTTATCTAA CTTTTTATTG CAGCGAATTA AAACTATTTT ACTGGAGGAA AAAAATATTG ATTATGATTT AGTAAATGCG GTTTTAGGCG ATAACGATGC TGAATATAAA GAAAGAGGAT TAAAAGATTT ATTAGATGTG CGTAATCGGG CAATTTTCTT ACAAAATATT CGGCAAAATG GTATGCTTGG TAAAATATAT GAAACTATTA ACCGTTCAAC TCGCTTAGCT GCTCAAGGTG AGTTGGATAA AATACAACTT AAGCCTTTAA AAGTTATAGA TTCAAAACTG TTTAAAAGTG AATCAGAATT AGCTTTTTAT AATGCTTTGG TTGAGTTAGT TCCTCAAACA GAAATATCTC AAAAAACCAG AAATTATCAA CAATTAGTCG ATGCCTTATT GAAAATAGCT CCTACAGTTA GTAATTTCTT TGATGGGCCT GACAGTGTAT TGGTAATAGA CCCTGACCCG AAAATTAAAA AAAATCGCTT GAATTTATTA GGTTTACTCC GCAACAATGC TAGAGTGTTG GCAGACTTTG GCCAAATAGT GAAAAATTAA
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Protein sequence | MIVTFLLEIG TEELPANFVY EAIQQWQELI PMTLKEAFLT NDSVNVYATP RRLAVVIDAL PTKQPDREEE IKGPPAKAAF KDGKPTKAAE GFSKKQGVQL NDLQICTTEK GDFVFVNKKI QGKPTAAILT ELIPKWIDKL EGKRFMRWAD GELKFPRPIR WLVALLDDEI LPINLDNGSQ KITSDRFSYG HRVLHPKLIE ISQAKNYVEV LKKAYIEVDY KQRKSKIEQQ IKTAAEEIKG KAEISEELLA EVTNLVEWPT VVIGKFDEEF LILPGEVTTT VMETHQRYFP VFKSTKTFKD MELLPYFITI SNGDPEKSEI IAIGNERVIK ARLADGQFFY KTDLAKPLES YLPELETVTF QAKLGSMREK VKRIVSIAKL IAGQLQITQE ESKNIERAAL LCKADLVTQM VYEFPELQGV MGEKYARAAG ETEAVATAIF EHYLPRGAGD ILPKTISGQV ISLADRLDTL VSIFGLGMLP TGSADPFALR RAANGVVNIS WSANLPLNLH QLLEEIATNF FKTYSQTNSD LLAQLSNFLL QRIKTILLEE KNIDYDLVNA VLGDNDAEYK ERGLKDLLDV RNRAIFLQNI RQNGMLGKIY ETINRSTRLA AQGELDKIQL KPLKVIDSKL FKSESELAFY NALVELVPQT EISQKTRNYQ QLVDALLKIA PTVSNFFDGP DSVLVIDPDP KIKKNRLNLL GLLRNNARVL ADFGQIVKN
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