Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_4449 |
Symbol | |
ID | 4246102 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | + |
Start bp | 6859545 |
End bp | 6860168 |
Gene Length | 624 bp |
Protein Length | 207 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 638109332 |
Product | biopolymer transport protein ExbD/TolR |
Protein accession | YP_723909 |
Protein GI | 113477848 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0848] Biopolymer transport protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTATAA TTTCTCCTAG ATATCTAAAC CTAAAAATTA TGAAGCTTAA TCAAGAGTCT ATTAGTGAAG AAATTAGGAT TGAGTTAATA CCTCTAATTG ATGTAATTTT TTGTATTCTG ACTTTCTTTC TTTTAGCTGC TTTGCAGTTA ACCCGTCAAC AAGCAATTAA TGTTAATTTG CCAAAAGCTA CCACAGGTAA ACCTCAATCA CAAGATATGT TACTTGTGAG TTTGGATGAA GTAGGAAAAA CTTTTATTGA TAAACAACCT GTCAGTACTA TAGAATTAGA AAAGTTTGTA CGTAGATATA ATAAGCTTTC TCCTAGGGGG GTTGTTGTAT TATATGCTCC TAAGGAGGCC AAATATAATG ATGTTGTGCA AGTTTTAGAT TTGTTGCGAG AGGTGGGAGG CGATCGCGTG GCTCTAGCAA CTTTGCCCGG TTCTCCTCAA ACTGGTGCTG GTAATACTTC TGAGAATCCT GTGACTCCTT TTCAAGAAGA TAACAAAAAT AATCCAACAG GGACAACTGA TGCTGATAAT ACTTCAGATA ACTTGGTGAC TCCTTCATTT CCAGGAAGAA CTGTTGATCC TAATAAATAT AAATTACCAA AAGCTCCTGA ATAA
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Protein sequence | MTIISPRYLN LKIMKLNQES ISEEIRIELI PLIDVIFCIL TFFLLAALQL TRQQAINVNL PKATTGKPQS QDMLLVSLDE VGKTFIDKQP VSTIELEKFV RRYNKLSPRG VVVLYAPKEA KYNDVVQVLD LLREVGGDRV ALATLPGSPQ TGAGNTSENP VTPFQEDNKN NPTGTTDADN TSDNLVTPSF PGRTVDPNKY KLPKAPE
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