Gene Tery_4313 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_4313 
SymbolhemH 
ID4245965 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp6650853 
End bp6652016 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content38% 
IMG OID638109203 
Productferrochelatase 
Protein accessionYP_723781 
Protein GI113477720 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0276] Protoheme ferro-lyase (ferrochelatase) 
TIGRFAM ID[TIGR00109] ferrochelatase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.24508 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCGTG TTGGAATATT ATTACTTAAT TTAGGTGGGC CAGAACAACT TGAAGATGTA 
CGTCCCTTTC TTTTCAATTT GTTTTCTGAT CCAGAAATTA TTCGTCTACC CTTTCCTTGG
CTACAGAAAC CTTTGGCATG GTTCATTTCC ACTATGCGTT TTCAAAAGTC TCAGGAAAAT
TATAAAGAAA TTGGCGGTGG CTCTCCATTA AGATCAATTA CAGAAGAGCA AGCTCTGGCT
ATTCAACAAC AGTTAGAACA AAAAGGACTA CTGACTCAAA TGTATATAGG AATGCGTTAC
TGGCATCCTT TTACAGAAGA AGCTCTCACT AGAATTAAGC GCGAGCAAGT AGAAAAGTTA
GTAATCCTAC CACTATATCC TCAATATTCT ATCAGCACAA GTGGTTCAAG TTTTAGATTG
CTTGATAAAC TTTGGGAAAA AGACTCAGAA CTGAAGAAAA TTGAATACAC TGTTATTCCC
TCTTGGCATC AACGACCAGG ATATGTTCAG GCAATGGTAG AATTAATTAC TCAACAATTA
GACCAATCTC CCAACCCAGA TCAAGTACAT ATCTTTTTCA GCGCTCATGG TGTACCGGTC
AGCTATGTTG AAGAAGCCGG AGACCCTTAT CAGGCAGAAA TTGAAGAGTG TGTAGATAAG
ATAATGAAAA CTTTGAATTG CTCTAACCCT CATACTTTAG CTTATCAAAG TCGGGTTGGC
CCAGTGGAAT GGTTGAAGCC TTACACCGAA GATGCTATCG AAGAATTGGC TGCTGGTGGA
GTTAAAGATT TATTGGTAGT TCCTATTAGT TTTGTTTCTG AACATATTGA GACTCTACAA
GAAATTGACA TAGAATATCG TGAACTAGCA GAAGAAGCTG GAATTAGTAA TTTTTACCGA
GTACCTGCTC TGAATACTCA CCCAGTATTT ATTAATGATT TAGCAGATTT GGTTATGGAA
GCTTTAGATG CTCCAAGCCG TGATTTTTCT GATGCTATTC AGATGAAAAA AATTATTAAA
ATGTATCCCC AAGAAAGATG GCAATGGGGC TTAACTACTA CAGCAGAAGT CTGGAATGGA
CGATTAGCAA TGGTGGGCTT TATGGCTTTG TTGTTGGAGT TGATTACTGG TTATGGTCCC
TTACACTTTG CTGGTTTATT ATAA
 
Protein sequence
MSRVGILLLN LGGPEQLEDV RPFLFNLFSD PEIIRLPFPW LQKPLAWFIS TMRFQKSQEN 
YKEIGGGSPL RSITEEQALA IQQQLEQKGL LTQMYIGMRY WHPFTEEALT RIKREQVEKL
VILPLYPQYS ISTSGSSFRL LDKLWEKDSE LKKIEYTVIP SWHQRPGYVQ AMVELITQQL
DQSPNPDQVH IFFSAHGVPV SYVEEAGDPY QAEIEECVDK IMKTLNCSNP HTLAYQSRVG
PVEWLKPYTE DAIEELAAGG VKDLLVVPIS FVSEHIETLQ EIDIEYRELA EEAGISNFYR
VPALNTHPVF INDLADLVME ALDAPSRDFS DAIQMKKIIK MYPQERWQWG LTTTAEVWNG
RLAMVGFMAL LLELITGYGP LHFAGLL