| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_4311 |
|---|
| Symbol | |
|---|
| ID | 4245963 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Trichodesmium erythraeum IMS101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008312 |
|---|
| Strand | - |
|---|
| Start bp | 6646719 |
|---|
| End bp | 6648005 |
|---|
| Gene Length | 1287 bp |
|---|
| Protein Length | 428 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 638109201 |
|---|
| Product | glutamate dehydrogenase (NADP) |
|---|
| Protein accession | YP_723779 |
|---|
| Protein GI | 113477718 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0334] Glutamate dehydrogenase/leucine dehydrogenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.577025 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.435234 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCAGATT CTTTGTTTGA TGATGCTAGT CGTAGGTTAG AAAGGGCTTT ACAATATGTT
TCTCTTTCAG AAGATACAAA AGAACGTCTC AAATACCCTA AAGCTACCTT AATAGTTTCT
ATTCCTGTCC GGATGGATGA TGGCTCATTA CGAGTTTTTC AAGGTTATCG AGTTCGTTAT
GATGATACAA GAGGACCCAC AAAAGGTGGC ATTCGTTATC ATCCCAATGT GTCTATTGAT
GAAGTAAAGT CTTTGGCTTT TTGGATGACT TTTAAATGTG CTGTTGTCAG TTTGCCTTTT
GGAGGGGCCA AAGGTGGCAT TACTGTTAAT CCTAAAGAAT TATCTCGGAT GGAATTGGAA
CGTTTGAGTC GGGGGTATAT TGATGCGATC GCTGATTTTA TCGGTCCTGA TACCGATATT
CCTGCACCGG ATATGTATAC TAACCCCATG ATAATGGGTT GGATGATGGA TGAATACAGC
ATTATTCGCA GACAACTAAG TCCGGCAGTT ATTACGGGTA AACCTGTGAG CATCGGTGGT
AGTTTGGGAA GAAATACTGC AACGGCAATG GGTGCTTTTT TTGCTATTGA AACTATTATG
CCGAAGTTTG AATATACTCC TGAAAAAACT ACAGTAGCAA TACAAGGGTT TGGTAATGCC
GGGGCGTTTT TAGCTGAGTT ACTATGTCTT CATGGTTATA AGGTTGTTGC TGTTAGTGAT
TCTCAGGGAG GTATTTATTC TGCACAAGGT TTAGATATTC CAAGTATTCG TCAATATAAG
GAAGTTAATA AACAGATACA AGCAGTTTAT TGCAAGGATA GTGTTTGCAA TATTGTTGAG
CATACAGTTT TGACTAATGA AGAACTTTTA GCTTTGGATG TTGATATTTT AATTCCTGCT
GCTTTGGAGA ATCAAATTAC TGAGGAAAAT GTCAAAGATA TTCAGGCAAA GTTTATTTTT
GAAGCTGCTA ATGGTCCGAC TACTTCTGGT GCAGATAAAA TTTTAGAAGA CCGTGGAGTT
TATGTATTTC CTGATATTTT GATAAATGCT GGTGGTGTGA CTGTCAGTTA TTTTGAGTGG
GTACAAAATC GTAGTGGTTT GTATTGGACT TTGGATGAAG TTAATCAAAA ATTGAAAGCA
AAAATGGTCG CAGAAACAGA GAATATTTGG CAAATATCTC AGGAGTTATC TATTTCTATG
CGAACTGCTG CTTATGTGCA TGGTTTAGAT AGATTAGGAC AAGCAATTAA TGCTAAAGGA
ACTAGAGCTT TTTATGCCAA AAGGTAG
|
|---|
| Protein sequence | MSDSLFDDAS RRLERALQYV SLSEDTKERL KYPKATLIVS IPVRMDDGSL RVFQGYRVRY
DDTRGPTKGG IRYHPNVSID EVKSLAFWMT FKCAVVSLPF GGAKGGITVN PKELSRMELE
RLSRGYIDAI ADFIGPDTDI PAPDMYTNPM IMGWMMDEYS IIRRQLSPAV ITGKPVSIGG
SLGRNTATAM GAFFAIETIM PKFEYTPEKT TVAIQGFGNA GAFLAELLCL HGYKVVAVSD
SQGGIYSAQG LDIPSIRQYK EVNKQIQAVY CKDSVCNIVE HTVLTNEELL ALDVDILIPA
ALENQITEEN VKDIQAKFIF EAANGPTTSG ADKILEDRGV YVFPDILINA GGVTVSYFEW
VQNRSGLYWT LDEVNQKLKA KMVAETENIW QISQELSISM RTAAYVHGLD RLGQAINAKG
TRAFYAKR
|
|---|
| |