Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_4268 |
Symbol | |
ID | 4245920 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | + |
Start bp | 6583705 |
End bp | 6584580 |
Gene Length | 876 bp |
Protein Length | 291 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 638109160 |
Product | 2,3-dimethylmalate lyase |
Protein accession | YP_723738 |
Protein GI | 113477677 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2513] PEP phosphonomutase and related enzymes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.485286 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.877406 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGCAG GCAAAAAGTT ACGTCAAATA TTAGAACAAC CAGGTGCTCT CGTGTTACCA GGGGTTTATG ATTGCATTGG GGCAAAAATT GTGGAACAAA TAGGATTTCC TGTTGTTTTT ACTAGCGGTT TTGGTATTTC TGGCTCTACA CTGGGTCGGC CTGACTATGG TTTTATTACT GCTACAGAAA TGCTCTATGC TATTAGGCGT ATTACTGAGT CAGTTAATAT TCCTTTGGTA GCTGATATTG ATACTGGATA TGGCAACCCA CTCAATGTGA TTAGAACTGT GACTGATATT GTCAATATGG GGGTTGCCGG AATTATTTTG GAAGACCAAG AATGGCCGAA AAAGTGCGGT CACTTTCAGG GTAAGCGGGT TATTCCTATG GCAGAACATG TGGAGAAAAT TAAAGCGGCG GTTCATGCTA GGGGCGATAG TGGTTTAGTC ATTATTGCTC GCACGGATGC TCGTGCTCCA TTGGGTTTGG ATGAAGCTAT TAAGCGGGGA CGTGCTTGTG CTGAAGCTGG TGCGGATGTG GTTTTTATTG AGGCGCCTCA GTCTCTGGAA GATTTGCAGG CGATCGCTAC TGCTTTTGAG GATGTCTATT TATTTGCAAA TATGATTGAG GGTGGAAAAA CTCCGGTTTT GTCTGGTCAG GAATTGGCAG AAATGGGTTT TAAAATAGTG GTTTATCCTT TGTCAGGATT ATTTTCTGCT ACTCAAGCGA TGATCAATTG TTATCGTCAA TTATTTGAAA ATGGAACTAC GGCAGGGTTG CAAGATATTG TTTCGTTCCA GGATTTTGAA AATATTATTG AAGTGCCTAA ATATCAAGAG TTGGAGCAGA AGTTTTCAGT TGATGTTAGG CATTAG
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Protein sequence | MSAGKKLRQI LEQPGALVLP GVYDCIGAKI VEQIGFPVVF TSGFGISGST LGRPDYGFIT ATEMLYAIRR ITESVNIPLV ADIDTGYGNP LNVIRTVTDI VNMGVAGIIL EDQEWPKKCG HFQGKRVIPM AEHVEKIKAA VHARGDSGLV IIARTDARAP LGLDEAIKRG RACAEAGADV VFIEAPQSLE DLQAIATAFE DVYLFANMIE GGKTPVLSGQ ELAEMGFKIV VYPLSGLFSA TQAMINCYRQ LFENGTTAGL QDIVSFQDFE NIIEVPKYQE LEQKFSVDVR H
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