Gene Tery_4268 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_4268 
Symbol 
ID4245920 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp6583705 
End bp6584580 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content42% 
IMG OID638109160 
Product2,3-dimethylmalate lyase 
Protein accessionYP_723738 
Protein GI113477677 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2513] PEP phosphonomutase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.485286 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.877406 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGCAG GCAAAAAGTT ACGTCAAATA TTAGAACAAC CAGGTGCTCT CGTGTTACCA 
GGGGTTTATG ATTGCATTGG GGCAAAAATT GTGGAACAAA TAGGATTTCC TGTTGTTTTT
ACTAGCGGTT TTGGTATTTC TGGCTCTACA CTGGGTCGGC CTGACTATGG TTTTATTACT
GCTACAGAAA TGCTCTATGC TATTAGGCGT ATTACTGAGT CAGTTAATAT TCCTTTGGTA
GCTGATATTG ATACTGGATA TGGCAACCCA CTCAATGTGA TTAGAACTGT GACTGATATT
GTCAATATGG GGGTTGCCGG AATTATTTTG GAAGACCAAG AATGGCCGAA AAAGTGCGGT
CACTTTCAGG GTAAGCGGGT TATTCCTATG GCAGAACATG TGGAGAAAAT TAAAGCGGCG
GTTCATGCTA GGGGCGATAG TGGTTTAGTC ATTATTGCTC GCACGGATGC TCGTGCTCCA
TTGGGTTTGG ATGAAGCTAT TAAGCGGGGA CGTGCTTGTG CTGAAGCTGG TGCGGATGTG
GTTTTTATTG AGGCGCCTCA GTCTCTGGAA GATTTGCAGG CGATCGCTAC TGCTTTTGAG
GATGTCTATT TATTTGCAAA TATGATTGAG GGTGGAAAAA CTCCGGTTTT GTCTGGTCAG
GAATTGGCAG AAATGGGTTT TAAAATAGTG GTTTATCCTT TGTCAGGATT ATTTTCTGCT
ACTCAAGCGA TGATCAATTG TTATCGTCAA TTATTTGAAA ATGGAACTAC GGCAGGGTTG
CAAGATATTG TTTCGTTCCA GGATTTTGAA AATATTATTG AAGTGCCTAA ATATCAAGAG
TTGGAGCAGA AGTTTTCAGT TGATGTTAGG CATTAG
 
Protein sequence
MSAGKKLRQI LEQPGALVLP GVYDCIGAKI VEQIGFPVVF TSGFGISGST LGRPDYGFIT 
ATEMLYAIRR ITESVNIPLV ADIDTGYGNP LNVIRTVTDI VNMGVAGIIL EDQEWPKKCG
HFQGKRVIPM AEHVEKIKAA VHARGDSGLV IIARTDARAP LGLDEAIKRG RACAEAGADV
VFIEAPQSLE DLQAIATAFE DVYLFANMIE GGKTPVLSGQ ELAEMGFKIV VYPLSGLFSA
TQAMINCYRQ LFENGTTAGL QDIVSFQDFE NIIEVPKYQE LEQKFSVDVR H