| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_4232 |
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| Symbol | |
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| ID | 4245884 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Trichodesmium erythraeum IMS101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008312 |
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| Strand | - |
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| Start bp | 6533207 |
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| End bp | 6535552 |
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| Gene Length | 2346 bp |
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| Protein Length | 781 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 638109128 |
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| Product | ATP-dependent DNA helicase Rep |
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| Protein accession | YP_723706 |
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| Protein GI | 113477645 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
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| TIGRFAM ID | [TIGR01073] ATP-dependent DNA helicase PcrA |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.491131 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.505763 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAAGCA CTGACTTTCT GACTCAGCTA AATTTATCCC AACGCCAAGC AGTAGAACAT
TTCTGCGGAC CTATGTTGGT CGTGGCGGGT GCTGGGTCTG GCAAAACTAG GGCGTTGACT
TATCGTGTAG TCCATCTAAT ACGTCATCAT CGGGTACATC CAGAAAATAT TCTGGCGGTT
ACCTTTACAA ATAAAGCTGC ACAGGAAATG AAGGACCGCA TTGAAAAAGT ATTTGCTCAA
GAACAAGCGG AAGCTAAATA TAACAAACCA TTTTCAGCAT TGACATCAGA AGAACAAATC
AGGTTGCGAT CGCAAGTCTA CAAAAATATC ACTAAACATT TATGGGTGGG AACTTTTCAT
AATCTTTGCG CTCGTATTCT GAGGTTTGAT ATTAACAAAT ATCAGGATGA AAAAAAACGT
CATTGGGATA AAAATTTTTC TATATTTGAT GAAAGTGATG CTCAAAGTTT AATTAAGCAA
ATTGTCACTA AACAGCTAAA TTTGGATGAT AAAAAATTTG AACCACGTTC TGTGAGATAT
GCCATTAGTA ATGCTAAAAA CCAAGGAATG TCACCTCTAG AATATCAAAG AGCCGAGCCA
GATTATCGGG GACGGGTAAT TGCTGAAGTT TATGGAATTT ATCAAGATAA TTTAGCTGCG
AACAATGCTC TTGATTTTGA CGACCTAATC AGAATACCAG TAGAATTATT TCGGCAAAAT
GAGCAAATAT TAGCTTATTG GTATCAACGT TTTAATCATA TTTTAGTAGA TGAATATCAA
GATACTAATC GGACTCAATA TAATTTTATT AGATTTTTAG CTACTAATGG TGAAGACCCT
AAATATATTA AAAACTGGGA AAATCGTTCT ATTTTTGTGG TAGGAGATGT AGACCAATCT
ATTTATTCTT TCCGCATGGC AGATTATACA ATTTTGCTTG ATTTTCAGAA TGATTTTGGC
GATGGTTTAG CTGATGAATA TACTCAGACA ATGATTAAGT TGGAGGAAAA TTATCGCTCA
CGGGAAAATA TTTTGGCAGT GGCAAATAAG TTGATTGAAA ATAATACTCA ACGTATTGAC
AAAACTCTCA AACCAACCAG GGGCATAGGG GAAGAAATTT ATTGTTATGA GGCAGAAAAT
GAGTTAGAAG AAGCAGAATT TATTTGTAGT AAAATTGCAG AAATTACAGA CCAATATCCA
GACTTAGATT TAGGAAGCTT CGCTGTACTT TATCGAACAA ACTCTCAGTC ACGCTCCCTC
GAAGAAAAGT TGATTCATTA TGATATTAAA TATGTCATAA TTGGGGGATT GAGATTTTAT
GATCGGAAAG AAATTAAGGA TGCTTTAGCT TATTTACGAG TCATTGCAAA TCCTGCTGAT
ACTGTTAGTT TACTCAGAAT TATTAACACT CCGAGAAGGG GTATTGGCAA GGCAACTATT
GATAGTTTAT TAAATGCTAG TTCCCAGATG GGAATACCTT TGTGGGAAAT TATTAATGAT
CAAGCTTCAG TAAATGCTTT GGCAGGTCGT TCATCAAAAG CTGTAAATAA GTTTGCCGAA
GTAATTCAAC ATTTGCAAGA TGAGTTAGAA AATTTGACTG CTCTGGAAAT TGTTGAGAGA
ATTTTAGAAA ATTCTGGTTA TATTGAAAAC TTGAAAAAAC AGGATACGGA AGATGCAGAT
AATCGACTGG CAAATTTAGG AGAATTATGT AGTGCTGTAG CTCAGTTTCA AGAAGATAAT
GAAGATACAA CTTTAGGAAG TTTTTTAGCA AATGCTTCTT TAGCTTCTAA TTTAGATAAC
CTTCAAGATG GGCAGGAAGC TGTGTCTTTA ATGACTTTAC ATTCTGCTAA AGGTTTAGAA
TTTCCCGTAG TATTTATAGT GGGTTTGGAG CAAGGTTTAT TACCTCATTT TCGGAGCATA
AATGACCCTT TATCTTTAGA AGAAGAAAGG CGACTTTGTT ATGTAGGTAT TACTAGAGCC
GAAGAACAAT TATTTTTTTC TTATGCAACT GAAAGACGAC AGCTTTGGGG AGCAAGAGAT
GCCACAGTTC CATCTCAATT TTTGGGAGAA TTACCAAGAG ATTTGATTAA TACTAATGGG
ATGAAAAAAG TAATTTATCC GTCAAAGCAT CAAAGGAAAA ACACAAAAAA TACTGTTGGA
AAAAAATCGG TAAGTAATCA AATAAAAAGT TGGCAAGTCG GGGATAAAGT GATGCATGAA
AGTTTTGGTG TGGGGTTAGT AACAAACATT CTGGGTGAAG GACATAAGAT GAGTTTAGGT
ATCAAATTTG GTAAGAGTAA AAAAATTATT GATCCCAAAA CGCCATCAAT AGAAAAGTTG
AATTAA
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| Protein sequence | MPSTDFLTQL NLSQRQAVEH FCGPMLVVAG AGSGKTRALT YRVVHLIRHH RVHPENILAV
TFTNKAAQEM KDRIEKVFAQ EQAEAKYNKP FSALTSEEQI RLRSQVYKNI TKHLWVGTFH
NLCARILRFD INKYQDEKKR HWDKNFSIFD ESDAQSLIKQ IVTKQLNLDD KKFEPRSVRY
AISNAKNQGM SPLEYQRAEP DYRGRVIAEV YGIYQDNLAA NNALDFDDLI RIPVELFRQN
EQILAYWYQR FNHILVDEYQ DTNRTQYNFI RFLATNGEDP KYIKNWENRS IFVVGDVDQS
IYSFRMADYT ILLDFQNDFG DGLADEYTQT MIKLEENYRS RENILAVANK LIENNTQRID
KTLKPTRGIG EEIYCYEAEN ELEEAEFICS KIAEITDQYP DLDLGSFAVL YRTNSQSRSL
EEKLIHYDIK YVIIGGLRFY DRKEIKDALA YLRVIANPAD TVSLLRIINT PRRGIGKATI
DSLLNASSQM GIPLWEIIND QASVNALAGR SSKAVNKFAE VIQHLQDELE NLTALEIVER
ILENSGYIEN LKKQDTEDAD NRLANLGELC SAVAQFQEDN EDTTLGSFLA NASLASNLDN
LQDGQEAVSL MTLHSAKGLE FPVVFIVGLE QGLLPHFRSI NDPLSLEEER RLCYVGITRA
EEQLFFSYAT ERRQLWGARD ATVPSQFLGE LPRDLINTNG MKKVIYPSKH QRKNTKNTVG
KKSVSNQIKS WQVGDKVMHE SFGVGLVTNI LGEGHKMSLG IKFGKSKKII DPKTPSIEKL
N
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