Gene Tery_4143 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_4143 
Symbol 
ID4245793 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp6390182 
End bp6391003 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content43% 
IMG OID638109044 
ProductUBA/THIF-type NAD/FAD binding fold 
Protein accessionYP_723624 
Protein GI113477563 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0476] Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.417024 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCTCCA ACCTTACACC AAAAGAATTA GAACGTTATA GTCGTCAAAT GATGCTCCCG 
GGCTTTGGAG AGGAAGCACA GCAACGACTC AAGTCAACAA CAGCAGTAGT AACTGGAGTT
GGTGGCTTAG GTGGCACGGT AGCATTGTAT TTAGCAGTAG CAGGTATCGG GAAATTAATT
TTAGTCCGAG GTGGAGAACT ACGGCTTGAT GACATGAACC GTCAAATCTT GATGACAGAC
GACTGGGTGG GTAAAGTCCG AGTAGACAAA GCAAAGGAAA CTCTATCTGC CATTAACCCA
GATATTGAAA TTGAAGCAGT TCCCGAATAT GTTACGGCTG AAAATGTCGA CCCATTGGTA
CAGTCTGCTG ATATTGCTAT AGACTGTGCC CACAACTTTG ACGAACGGAA TTTACTGAAT
GCTGCCTGTG TACGTTGGCG CAAACCAATG GTGGAAGCTG CCATGAATAG TATGGAAGCT
TATTTAACCA CCATAGATCC TGGTAAAACT CCTTGTTTGT CTTGTCTGTT CCCAGAAAAA
CCACAGTGGG ACAGACGTGG GTTCGGAGTA TTGGGGATAG TTTCTGGAAC TTTAGCTTGT
CTAGCAGCTT CAGAAGCTAT CAAACAGATT ACAGGATTTA GTAAACCCTT GTGGTCACAA
CTGCTAACAA TGAATTTGGA TAGCATGGAA TTTGCTAAAC TTCGCCCCTA CCATGACCCC
AACTGTCAGG TTTGCGGTTC TCTCAGTAGA GAATTAGTAG CTGACTCTAT AGCTATTAAG
AATAATTTTA CGACAGAAAT GATCACAACA AACAGTTTAT AG
 
Protein sequence
MISNLTPKEL ERYSRQMMLP GFGEEAQQRL KSTTAVVTGV GGLGGTVALY LAVAGIGKLI 
LVRGGELRLD DMNRQILMTD DWVGKVRVDK AKETLSAINP DIEIEAVPEY VTAENVDPLV
QSADIAIDCA HNFDERNLLN AACVRWRKPM VEAAMNSMEA YLTTIDPGKT PCLSCLFPEK
PQWDRRGFGV LGIVSGTLAC LAASEAIKQI TGFSKPLWSQ LLTMNLDSME FAKLRPYHDP
NCQVCGSLSR ELVADSIAIK NNFTTEMITT NSL