Gene Tery_4104 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_4104 
Symbol 
ID4245618 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp6331607 
End bp6332476 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content41% 
IMG OID638109005 
Productphycobilisome linker polypeptide 
Protein accessionYP_723585 
Protein GI113477524 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0150597 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.318068 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTTTTG GACCTGCATC TCAGTTAGGG GTTAGCCTTT TTGAAGATAC AGAACCCGTA 
GAGCTCTTAC CCGGACGCTC ATCAGAAGAA ATAGAAACTG TGATTCGAGC TGTCTATAAG
CAAGTTCTAG GCAATGCTTA TGTCATGGAA AGTGAAAGAC TCACTGTACC AGAGTCTAAA
CTTAAAGAAG GCACAATTAC TGTCCGTGAA TTTGTACGTC AAGTTGGACG CTCTGACTTG
TATCGTTCTC GGTTCTTTGA CCCTTGCCCC CGCTATCGTT CAGTTGAGTT AAATTTTAAG
CACTTTTTAG GTCGTGCTCC CGATGGCTAC GATGAAATGA AGCTTCACAG TAATCTTCTG
GATGAAGGAA GTTTTGAAGC TGATATTGAT TCCTACATTG ATAGTGATGA GTATAGTAGT
GCTTATGGAG AAAATATTGT TCCTTATTAT CGAGGTTACA AAACCCAAAC TGGTAAAAAA
ATGGTTGGTT TTACTCATAT CTTCCAACTA TTACGGGGGG CTTCCAGCAG CGACTTAAAA
GGAAGTTTAT CTGGAAACAG CCCTGCTTTA AATAAATATG TGATTCAAGA AACACCTTTA
GCAGTAGTTC CTCCTTCTGG GGGTTCAGAT GGTTGGTCAT TCCAGGATAC ACCTTTGGGT
GCTAGAAGTA GACATGGAGT CGGAGCTAGT TCTAGTGGTA AAGTTTACCG CGTTGAAGTA
ACAGCTTATC GCTCAAAAGT AGTAAATCGT GTTTCTAGAT TCCGCCGTAG TAATCAAGTA
TTTTTGGTAC CTTTTGATCA ACTTTCTAAA GAGTATCAAA GAATTCATCG GCAGGGTGGT
GTAATTGCAA GTATTACTCC TATTAGTTAG
 
Protein sequence
MVFGPASQLG VSLFEDTEPV ELLPGRSSEE IETVIRAVYK QVLGNAYVME SERLTVPESK 
LKEGTITVRE FVRQVGRSDL YRSRFFDPCP RYRSVELNFK HFLGRAPDGY DEMKLHSNLL
DEGSFEADID SYIDSDEYSS AYGENIVPYY RGYKTQTGKK MVGFTHIFQL LRGASSSDLK
GSLSGNSPAL NKYVIQETPL AVVPPSGGSD GWSFQDTPLG ARSRHGVGAS SSGKVYRVEV
TAYRSKVVNR VSRFRRSNQV FLVPFDQLSK EYQRIHRQGG VIASITPIS