Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_4104 |
Symbol | |
ID | 4245618 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | + |
Start bp | 6331607 |
End bp | 6332476 |
Gene Length | 870 bp |
Protein Length | 289 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 638109005 |
Product | phycobilisome linker polypeptide |
Protein accession | YP_723585 |
Protein GI | 113477524 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0150597 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.318068 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTTTTTG GACCTGCATC TCAGTTAGGG GTTAGCCTTT TTGAAGATAC AGAACCCGTA GAGCTCTTAC CCGGACGCTC ATCAGAAGAA ATAGAAACTG TGATTCGAGC TGTCTATAAG CAAGTTCTAG GCAATGCTTA TGTCATGGAA AGTGAAAGAC TCACTGTACC AGAGTCTAAA CTTAAAGAAG GCACAATTAC TGTCCGTGAA TTTGTACGTC AAGTTGGACG CTCTGACTTG TATCGTTCTC GGTTCTTTGA CCCTTGCCCC CGCTATCGTT CAGTTGAGTT AAATTTTAAG CACTTTTTAG GTCGTGCTCC CGATGGCTAC GATGAAATGA AGCTTCACAG TAATCTTCTG GATGAAGGAA GTTTTGAAGC TGATATTGAT TCCTACATTG ATAGTGATGA GTATAGTAGT GCTTATGGAG AAAATATTGT TCCTTATTAT CGAGGTTACA AAACCCAAAC TGGTAAAAAA ATGGTTGGTT TTACTCATAT CTTCCAACTA TTACGGGGGG CTTCCAGCAG CGACTTAAAA GGAAGTTTAT CTGGAAACAG CCCTGCTTTA AATAAATATG TGATTCAAGA AACACCTTTA GCAGTAGTTC CTCCTTCTGG GGGTTCAGAT GGTTGGTCAT TCCAGGATAC ACCTTTGGGT GCTAGAAGTA GACATGGAGT CGGAGCTAGT TCTAGTGGTA AAGTTTACCG CGTTGAAGTA ACAGCTTATC GCTCAAAAGT AGTAAATCGT GTTTCTAGAT TCCGCCGTAG TAATCAAGTA TTTTTGGTAC CTTTTGATCA ACTTTCTAAA GAGTATCAAA GAATTCATCG GCAGGGTGGT GTAATTGCAA GTATTACTCC TATTAGTTAG
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Protein sequence | MVFGPASQLG VSLFEDTEPV ELLPGRSSEE IETVIRAVYK QVLGNAYVME SERLTVPESK LKEGTITVRE FVRQVGRSDL YRSRFFDPCP RYRSVELNFK HFLGRAPDGY DEMKLHSNLL DEGSFEADID SYIDSDEYSS AYGENIVPYY RGYKTQTGKK MVGFTHIFQL LRGASSSDLK GSLSGNSPAL NKYVIQETPL AVVPPSGGSD GWSFQDTPLG ARSRHGVGAS SSGKVYRVEV TAYRSKVVNR VSRFRRSNQV FLVPFDQLSK EYQRIHRQGG VIASITPIS
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