Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_4054 |
Symbol | |
ID | 4242082 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | - |
Start bp | 6261961 |
End bp | 6262860 |
Gene Length | 900 bp |
Protein Length | 299 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 638108958 |
Product | AAA ATPase, central region |
Protein accession | YP_723539 |
Protein GI | 113477478 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1222] ATP-dependent 26S proteasome regulatory subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.0357172 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATTTG AACTAGTCAA GGAGAAAAAC AAGTCTAATG CCAAAGATGA AGTTAGTAGT TTACTCGAAA CACCTAAATG GACGTTAGAT GAAATAGCTT TGTCAAAAAC TACAATTGAG CAAATTAAAG AAATGATTGC TTATGTAAAA AATCGGGATA AATTGTTACT TGAATGGGAA TTTAATCGTT TTCTCAAAAC AGGTAATGGT TTAAGCATCA ACTTTTTTGG ATTACCAGGT ACAGGAAAAA GCATTACTGC TGAAGCCATT GCCAAAAAGT TAGAAACTCA GATCATCAAG GTTAATTATG GAGAATTAGA ATCTGAATTA GTAGGTGGTA CATCTAAGAA TTTATCAAAG GTTTTCAAGC TAGCTGAAGA AAATCAGAGC TTATTATTTT TTGATGAAGC TGATGCTGTA TTAAGTAAAA GAATTTCCAA CTTATCCCAA GCAGCAGATC ATGGTGTTAA CTCTGCCAAA AGCACCTTAT TAACATTGAT GGATAAGTTT AATGGCGTAA TTATATTTGC CACAAACTTA TTTGAAAATT ATGATGAGGC TTTTTTAAGG AGAATTATTT TTAATGTTGA GTTTCCCGTA CCAGATATAG AAATGAGAAC TCAACTTTGG CAATTTCATA TATCTGAAAA AGTGCCTAAA AATATCAGTT ATGAAAGAGC GGCTGAAATT AGTGAAGGAT TATGTGGTGG AGATATTAGG AACATCACAA TTAAGCTAGG ATTAAAATTG CTAGTTGGTA AAGTAAAAGT TATTGATGAA GAAGTTATAA ATGAAGAAAT CGACAAATAT AAAACTATCA AACTGCGTCA CAAAAAAATT AATTTAGCAG AAACAGTTGT TGTAGAAAAC GGAAATAATT CAAATTTAAA GGAGGAATAA
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Protein sequence | MKFELVKEKN KSNAKDEVSS LLETPKWTLD EIALSKTTIE QIKEMIAYVK NRDKLLLEWE FNRFLKTGNG LSINFFGLPG TGKSITAEAI AKKLETQIIK VNYGELESEL VGGTSKNLSK VFKLAEENQS LLFFDEADAV LSKRISNLSQ AADHGVNSAK STLLTLMDKF NGVIIFATNL FENYDEAFLR RIIFNVEFPV PDIEMRTQLW QFHISEKVPK NISYERAAEI SEGLCGGDIR NITIKLGLKL LVGKVKVIDE EVINEEIDKY KTIKLRHKKI NLAETVVVEN GNNSNLKEE
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