Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_3948 |
Symbol | |
ID | 4244031 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | + |
Start bp | 6105664 |
End bp | 6106587 |
Gene Length | 924 bp |
Protein Length | 307 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 638108867 |
Product | hypothetical protein |
Protein accession | YP_723449 |
Protein GI | 113477388 |
COG category | [R] General function prediction only |
COG ID | [COG1090] Predicted nucleoside-diphosphate sugar epimerase |
TIGRFAM ID | [TIGR01777] conserved hypothetical protein TIGR01777 |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.750895 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0776826 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAATAG CTATTACAGG AGCAACAGGG TTTGTAGGGA CTCGCTTAGT GGAGCGTCTA CATTCAGAGG GAGAAAAAAT ATTAGTATTA ACCCGCAACC TAGAAAAAGG AAAACGCATT TTTCCATCTT CAGCATATCC TAATCTAGAG GTAATAGGTT ACGAACCACA AAAGTCTGGT GCTTGGCAAA AATCTATAGA TGGCTGTGAC GGTGTCGTTA ATCTAGCGGG TGCTAGTATT GCCGATGAAC GTTGGAGTGC CAGTCGCAAG AAAGAGATTA TGGGTAGTCG CAAGGTAACT ACAGAAAAAT TGGTCGAGGC GATCGCTCAA TCTAATTCTA AACCATCAGT ATTAGTAAGT GGTTCAGCTA TTGGTTATTA TGGCATGAGC GAAACGGCAA CTTTTGACGA ACAGAGCAAT AGTGGGAATG ATTTTTTGGC AGAAGTTTGT CAGAAATGGG AAGCTGCTGC TCAACCTGTA AAGAATGTAG GAGTAAGACT AGTTATTTTA CGGATCGGTA TTGTATTGGG TTTAGGAGGC ACTATCTCAA AAATGCTTGC TCCGTTTAAA TTATTCGCTG GTGGTCCTAT TGGTAATGGC AGGCAATGGT TTTCTTGGGT ACATATTGAC GACCTAGTTG GTTTAATTCT GCATTCTCTA CGCAACCCAG AAATGCAAGG AGTATTCAAT GCTACTTCTC CTAATCCTGT ACGAATGGAA GAATTTTGTC AAGGTTTAGG AGAAGCTTTA AATCGACCCT CTTGGTTACC CGTACCTGAT TTTGCCATTG AATTGTTGTT GGGAGATGGT GCAGTAGTTG TATTGGAAGG TCAAAAAGTT TTACCGAAGC AGACTCAAGC TTCTGGATTT GAGTATCAAT ATCCTACTGT TAAACCTGCC CTAAAAAATA TTTTAGCTCC TTGA
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Protein sequence | MKIAITGATG FVGTRLVERL HSEGEKILVL TRNLEKGKRI FPSSAYPNLE VIGYEPQKSG AWQKSIDGCD GVVNLAGASI ADERWSASRK KEIMGSRKVT TEKLVEAIAQ SNSKPSVLVS GSAIGYYGMS ETATFDEQSN SGNDFLAEVC QKWEAAAQPV KNVGVRLVIL RIGIVLGLGG TISKMLAPFK LFAGGPIGNG RQWFSWVHID DLVGLILHSL RNPEMQGVFN ATSPNPVRME EFCQGLGEAL NRPSWLPVPD FAIELLLGDG AVVVLEGQKV LPKQTQASGF EYQYPTVKPA LKNILAP
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