| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_3933 |
|---|
| Symbol | |
|---|
| ID | 4244016 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Trichodesmium erythraeum IMS101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008312 |
|---|
| Strand | + |
|---|
| Start bp | 6079121 |
|---|
| End bp | 6080560 |
|---|
| Gene Length | 1440 bp |
|---|
| Protein Length | 479 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 638108855 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_723437 |
|---|
| Protein GI | 113477376 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.218593 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 0 |
|---|
| Fosmid unclonability p-value | 0.0000403133 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | unclonable |
|---|
| |
Sequence |
| Gene sequence | ATGACCAAAA ATATTATAAA TACTATGACC ATAGATGCTG ATACCTTTTT TCAGGCAATA
AACCCTAGGG TTCCTCTGTT TATAGATAAT GCGGAAATTG ACAAAAAATA CTATATTGAC
TTTTCTCCGG TGCGTGGGCA ACAGGTGATT AAGGATTTGA AGTCTACTAT TACTCGTTGG
TCTAAAGGTA AACCTACCTG TCAATTATTT ACTGGACATA TTGGTTGTGG TAAGTCTACA
GAACTCTGGC GACTGAAGCA ACAGTTGGAA ACAGCAGGTT ATCATGTTGT TTATTTTGAG
TCTGAAAAAA ACCTGGAAAT GGTAGATGTG GATGTTAGTG ATATTCTTTT GACTATTGCC
CAAAAGGTGA GTGAAAGTTT GGAGAAGTTA GAAAGATTAA ATTTGGAAGA GCCAAAAAGG
CTAAAAGGTC TACTTCAGAG TATTGTTAAA TTATTACAGA CAGAAATTGA ATTTTCGGCA
GAAACTACTG TTCCTGGTGT GGGTAAGTTG TCAGCTAGCA GTGATGGTTC ATTTTCGGCA
GATTTAGGAA TAGTTGAAGT GAAGGCTGAT GAGGAAGGGT TAGAGTTTGT GGCTTCAGGT
ATTGGTAAAA TTTCTGCACA GGCAAAGGGT AGCCCGGAAC TCCGCACTAA ACTGAGGGAA
TATCTGGGAC CTCGCACCCC TGGAATTATT GAGATGATCA ACAAAGAGTT GCTTGAACCT
GCTGATCAGA AGTTGAAAGA GTATGGTAAA AAGGGGTTGG TTGTGATCGC TGATAGTCTT
GATAAGGTTG ATAGTTCCCC AAAACCTTGG GGTAGAAATC AGCAGGAATA TTTGTTTGTA
GACCGAGGAG AGCAACTAAC AAGCCTTCAG TGTCATCTGA TTTATACTTT ACCTATAGCA
CTGCGTTTTT CTAATGACTA CGGTACTTTA ACTCAAAGGT TTGATGCTCC TAAGATATTG
CCGATGGTAG CTACACAGTT ACAGGATGGC AGTGAATGTA TTGCTGGAAT GGAGTTAATG
CGACAGTTGG TTTTGGCTAG GGCTTTTCCA GAGTTAACAC CACAGGAAAG GTTGGCAAGG
GTGACGGAAG TGTTTGATAG TCAGGAAACT TTAGACTATT TATGTTGGGT TAGTGGGGGT
CATGTCAGGA ATATGTTCCG AATGGTACTT GATGCTCTCA AGGAGGAGGA TGACTTACCT
ATTTCTCGTG GGAGTGTTGA CAATGTAGTG AGAAATTATC GCAATGAACA ACTTTTGGCT
ATAGATGATC ACGAGTGGGA GTTATTACGG CAGGTAGTTC AAACAAAAAA AGTAACGGGT
GATGACGGAT ACCAAATTTT AATCCGGAGC ATGTTTGTTT ATGAGTATCA ATATGACCAG
AGTTCTTGGT TTAATATTAA TCCTCTTTTG AAAGATGCAC CAGAATTGAA GATAAGTTAA
|
|---|
| Protein sequence | MTKNIINTMT IDADTFFQAI NPRVPLFIDN AEIDKKYYID FSPVRGQQVI KDLKSTITRW
SKGKPTCQLF TGHIGCGKST ELWRLKQQLE TAGYHVVYFE SEKNLEMVDV DVSDILLTIA
QKVSESLEKL ERLNLEEPKR LKGLLQSIVK LLQTEIEFSA ETTVPGVGKL SASSDGSFSA
DLGIVEVKAD EEGLEFVASG IGKISAQAKG SPELRTKLRE YLGPRTPGII EMINKELLEP
ADQKLKEYGK KGLVVIADSL DKVDSSPKPW GRNQQEYLFV DRGEQLTSLQ CHLIYTLPIA
LRFSNDYGTL TQRFDAPKIL PMVATQLQDG SECIAGMELM RQLVLARAFP ELTPQERLAR
VTEVFDSQET LDYLCWVSGG HVRNMFRMVL DALKEEDDLP ISRGSVDNVV RNYRNEQLLA
IDDHEWELLR QVVQTKKVTG DDGYQILIRS MFVYEYQYDQ SSWFNINPLL KDAPELKIS
|
|---|
| |