| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_3881 |
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| Symbol | ubiA |
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| ID | 4243544 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Trichodesmium erythraeum IMS101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008312 |
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| Strand | - |
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| Start bp | 6002976 |
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| End bp | 6004025 |
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| Gene Length | 1050 bp |
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| Protein Length | 349 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 638108809 |
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| Product | tocopherol phytyltransferase |
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| Protein accession | YP_723391 |
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| Protein GI | 113477330 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0382] 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.630797 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00732369 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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| |
Sequence |
| Gene sequence | ATGGGAAAAA TTGCTGGTTC TCAACAGGGA AAAATTACAA CGAATTGGCT ACAAAAATAT
GTGCCATGGC TTTATAGTTT TTGGAAGTTT GCTCGCCCAC ATACGATTAT TGGTACATCG
TTAAGTGTGC TGGCTTTATA TATAATTGCC ATGGGCGATC GCTCTAATTT TTTTGACAAA
TATTTTTTTT TATACAGCTT AATTCTGTTA TTGATAACTT GGATTAGTTG TTTATGTGGA
AATATTTATA TAGTAGGATT AAATCAATTA GAGGATATAG AAATAGATAG GATTAATAAG
CCTCATCTCC CTATAGCTGC TGGTGAGTTT TCTCGTTTTT CTGGTCAAAT AATTGTGGTA
ATAACGGGTA TTTTGGCTTT GAGTTTTGCC GGGTTGGGGG GACCTTTTTT GTTGGGTACA
GTGGGGATAA GTTTGGCAAT TGGTACGGCT TATTCTTTAC CTCCTATTCG ATTAAAAAGA
TTTCCTGTTT TGGCCGCATT ATGTATTTTT ACTGTGCGGG GAGTTATTGT TAATTTGGGT
ATATTTTTAA GCTTTGTTTG GGGGTTTGAA AAGGTTGAGG AGGTTTCAGG AGGTTTAATT
AAATGGATGG GTGAGTTGGG TGAGGTTGTT CTACTTCAAA AAAGCTTGAT GGTTCCAGAA
ATTCCTCTGA CGGTATGGGC TTTAACTTTG TTTGTGATAG TATTTACTTT TGCTATTGCT
ATTTTTAAGG ATATTCCAGA TATTGAGGGT GACCGTCAAT ATAATATTAA TACGTTTACG
ATTAAGTTGG GAGCATTTGC TGTTTTTAAT TTGGCAAGGT GGGTATTGAC TTTTTGCTAT
CTGGGTATGG TGATGGTGGG TGTAGTTTGG TTGGCGAGTG TTAATTTATT TTTTTTGGTG
ATTAGTCATT TATTGGCTTT GGGTATAATG TGGTGGTTTA GTCAAAGGGT AGATCTGCAT
GATAAAAAGG CGATCGCTGA TTTTTATCAA TTTATTTGGA AATTATTTTT CCTGGAATAT
CTAATTTTTC CTATGGCTTG TTTTTTTTAA
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| Protein sequence | MGKIAGSQQG KITTNWLQKY VPWLYSFWKF ARPHTIIGTS LSVLALYIIA MGDRSNFFDK
YFFLYSLILL LITWISCLCG NIYIVGLNQL EDIEIDRINK PHLPIAAGEF SRFSGQIIVV
ITGILALSFA GLGGPFLLGT VGISLAIGTA YSLPPIRLKR FPVLAALCIF TVRGVIVNLG
IFLSFVWGFE KVEEVSGGLI KWMGELGEVV LLQKSLMVPE IPLTVWALTL FVIVFTFAIA
IFKDIPDIEG DRQYNINTFT IKLGAFAVFN LARWVLTFCY LGMVMVGVVW LASVNLFFLV
ISHLLALGIM WWFSQRVDLH DKKAIADFYQ FIWKLFFLEY LIFPMACFF
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