Gene Tery_3860 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_3860 
Symbol 
ID4243522 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp5963776 
End bp5964636 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content38% 
IMG OID638108790 
Productprolyl aminopeptidase 
Protein accessionYP_723373 
Protein GI113477312 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID[TIGR01250] proline-specific peptidases, Bacillus coagulans-type subfamily 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.4706 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0554671 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAGCTA AAATACGAGA TACAGAAATC TATTTTGATA TTGAAGGTGC TGCCCTAATT 
CCAGATGGTG ATCGGATGCA AGAAAAACCT ATTGCTTTTG TAATTCACGG CGGCCCTGGT
GCAGATCATA CTTCTTATAA ACCTACCTTT TCTCCTCTTA GTCAAAAATT ACAATTAGTA
TATTTTGACC ACCGGGGACA AGGGCGATCG GCAAGGGGGC TAAAAGAAAG TTATACCCTA
GAAAATAATG TGGAAGATAT GGAGGCATTA CGTCAATATT TGGGCATAGA AAAAATTGTT
CTTATTGGTA CTTCTTACGG CGGAATGGTT GCCCTTAGCT ATGCAGTACG TTATCCAGAA
AGTGTTCAAT CTTTAATTGT CATTGCTACA GCTGCAAGTT ATCGTTTTTT GGAATTGGCA
AAAGTTAATC TAGCTAAAAA AGGAACAACA GAACAACAAG CGATCGCTCA ACTTTTATGG
GATGGTAAAT TTGAAAATGA GGCACAACTC AAAGAATATT TTCAGGTGAT GATGTCTATG
TATTCAATTA CCTATAAAGC AGAAACATCA GGGAAAAGTT GGAATGGAGC TATTTTATCT
CCCGATGCTA TTAATGTTGC CTTCGGTGGT TTTTTGCGTT CTTACAATGT ACTCGATCAA
CTACATAAAA TTACTGCTCC TACTTTAGTA ATAGGGGGCA AACATGATTG GATCTGTCCC
CCGGAATTAT CAGAACAAAT TGCTGCAGCT ATTCCTAATA CAGATTTAAG AATCTTTGAA
AACAGCGGTC ATTTAATTCG GGTTGATGAA CCAGAAGCAC TTCTAGATGC AATTATGGTT
TTTTTAGTGA ACAAGGGATA A
 
Protein sequence
MRAKIRDTEI YFDIEGAALI PDGDRMQEKP IAFVIHGGPG ADHTSYKPTF SPLSQKLQLV 
YFDHRGQGRS ARGLKESYTL ENNVEDMEAL RQYLGIEKIV LIGTSYGGMV ALSYAVRYPE
SVQSLIVIAT AASYRFLELA KVNLAKKGTT EQQAIAQLLW DGKFENEAQL KEYFQVMMSM
YSITYKAETS GKSWNGAILS PDAINVAFGG FLRSYNVLDQ LHKITAPTLV IGGKHDWICP
PELSEQIAAA IPNTDLRIFE NSGHLIRVDE PEALLDAIMV FLVNKG