| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_3780 |
|---|
| Symbol | |
|---|
| ID | 4243728 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Trichodesmium erythraeum IMS101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008312 |
|---|
| Strand | - |
|---|
| Start bp | 5810073 |
|---|
| End bp | 5810984 |
|---|
| Gene Length | 912 bp |
|---|
| Protein Length | 303 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 638108716 |
|---|
| Product | putative agmatinase |
|---|
| Protein accession | YP_723300 |
|---|
| Protein GI | 113477239 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0010] Arginase/agmatinase/formimionoglutamate hydrolase, arginase family |
|---|
| TIGRFAM ID | [TIGR01230] agmatinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.547694 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCAACAA TTTACTCTAC CTTGCTTCTA CCATTCATTG GTTCAGAAAT TGAGCCAGAT
TACACTACCG CTAAAGTAGT AATTGTACCA ATTCCTTATG AGGCAACTAC TACTTATAGA
AGAGGTTGTG TTAATGGTCC AGCAGTATTA TTAAATGCAT CTCAACAGTT AGAATGTTAT
GACGAAGAAT TAGATAGGGA AACAGGTTTG GAAGTTGGTA TCTATACTCA CGAACCTATA
GCAGATACTC GTAATGGAAA AAAAATTACT CCATTAGATA TGCTAAAAGT AACTCAAGAA
ACAGTGGAAA AATTAGTTAG TGATGGAAAG TTTGTGATTG CTATAGGTGG AGAACATAGT
ATTACAAATG GGATAGTAAA AGCTTATAAA AAATTATATT TTGATGAACC TTTTACCGTG
ATTCAAATAG ATGCTCATGG AGATTTGCGA TATGAATATG AAGGTTCAAT ATATAATCAT
GCCTGTGTAA TGCGGCGGAT ATTTGAGATG GGGTTACCAA TGGTACAAAT AGGTATTCGG
GCAATTTGTA AAGAAGAAGC TGATTTAATA AAGGATAAAA ATTTAACTGT TTTTAAAGCA
AGAGAAATAG CTATTCAGCC AGATTGGATG GAAAGAGTAA TCTCTAGTAT TCAGACTAAA
AATGTGTTTT TAACGATAGA TTTAGATGGA ATTGACCCAA CATTAATTCC TGGAGTTGGC
ACACCAGAAC CAGGAGGACT AAATTGGTAT TCTTTAACTA CATTTTTACG AAGAATATTT
GAATTATATC AAGTATTAGG TTGTGACATT ATGGAGTTGG CTCCAATTAC TGATTCGGTA
GTATCTGAGT TTACTGCAGC AAAATTAGTT TATAAACTTG TTGGTTATCA AGCATTAGCT
CAAGACTGGT AG
|
|---|
| Protein sequence | MSTIYSTLLL PFIGSEIEPD YTTAKVVIVP IPYEATTTYR RGCVNGPAVL LNASQQLECY
DEELDRETGL EVGIYTHEPI ADTRNGKKIT PLDMLKVTQE TVEKLVSDGK FVIAIGGEHS
ITNGIVKAYK KLYFDEPFTV IQIDAHGDLR YEYEGSIYNH ACVMRRIFEM GLPMVQIGIR
AICKEEADLI KDKNLTVFKA REIAIQPDWM ERVISSIQTK NVFLTIDLDG IDPTLIPGVG
TPEPGGLNWY SLTTFLRRIF ELYQVLGCDI MELAPITDSV VSEFTAAKLV YKLVGYQALA
QDW
|
|---|
| |