| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_3778 |
|---|
| Symbol | frr |
|---|
| ID | 4243726 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Trichodesmium erythraeum IMS101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008312 |
|---|
| Strand | - |
|---|
| Start bp | 5808254 |
|---|
| End bp | 5808802 |
|---|
| Gene Length | 549 bp |
|---|
| Protein Length | 182 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 638108714 |
|---|
| Product | ribosome recycling factor |
|---|
| Protein accession | YP_723298 |
|---|
| Protein GI | 113477237 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0233] Ribosome recycling factor |
|---|
| TIGRFAM ID | [TIGR00496] ribosome recycling factor |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.343725 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATCTAA AAGAAGCTGA AGAGAAAATG CAAAAAGCTA TTGAAGCGAC TAAAAATTCC
TTCAATACTG TTAGAACTGG AAGAGCTAAT GCTTCTCTTT TGGACAGAGT AATGGTGGAG
TATTATGGAT CCCCAACTCA ACTCAAATCT ATGGCAAATA TTGGCATCCC AGATGCTAGT
ACAATTACTA TTCAACCTTA TGATAAAACC AGTCTCGGCT TGATTGAAAA AGCTATTAAT
ATGTCAGATG TTGGTTTAAC TCCTAACAAT GATGGGTCTA TTATACGGTT AAATATACCA
GCACTAACAG CTGAACGTCG TCAAGAAATG GTTAAAAAAA CAGCAAAACT TGCTGAAGAG
GGGAAAGTTT CTATCCGGAA TATTCGTCGT GATGCGGTAG ATTCAATTCG TAAACAAGAA
AAAAATAGTG ATATTTCTAA AGATGAATCA CGAGATTTGC AAGACAAAGT TCAAAAGAAG
ACTGATAAAT ATATTGCCAA AATAGATGAG TTACTAGCTG CTAAAGAGAA GGATATGACT
ACAGTTTAA
|
|---|
| Protein sequence | MNLKEAEEKM QKAIEATKNS FNTVRTGRAN ASLLDRVMVE YYGSPTQLKS MANIGIPDAS
TITIQPYDKT SLGLIEKAIN MSDVGLTPNN DGSIIRLNIP ALTAERRQEM VKKTAKLAEE
GKVSIRNIRR DAVDSIRKQE KNSDISKDES RDLQDKVQKK TDKYIAKIDE LLAAKEKDMT
TV
|
|---|
| |