| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_3575 |
|---|
| Symbol | |
|---|
| ID | 4244324 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Trichodesmium erythraeum IMS101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008312 |
|---|
| Strand | + |
|---|
| Start bp | 5501991 |
|---|
| End bp | 5503475 |
|---|
| Gene Length | 1485 bp |
|---|
| Protein Length | 494 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 638108543 |
|---|
| Product | GAF sensor signal transduction histidine kinase |
|---|
| Protein accession | YP_723132 |
|---|
| Protein GI | 113477071 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.242306 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTCAAC CTGAAAATAT AGAAAATTCT AGTGACAAAG ATATGAGTAA TCACTCCTTA
AATATAGCCA CAGTTATTAA AGTATTTCAA GCAATTTATA GTGAGATTGT CTTAGATAAG
TTACTATCTA AATTGATGAA AATTATCATG GAAAATACTG GTGCAGAAAA AGGTGTACTT
TTTCTACTAA CAAAAGGTGA ACTAATCAAT AGAGCTGAAG CTAACTTAGA TTCGGAAGCA
GTAGTAGTTC AAGAGACTCA AATTCATGAA TGTGAAGACT TACCACTAAC AGTAATTAAC
TATGTGGAGC GATCGCGCCA AGATGTTGTA TTAAGCAATG CTTTTGCTGA AGATAGCTTC
ACAACTGACC CCTATGTTGT CAAAGTTAAA CTGAAATCTG TTTTATGTAC TCCTATTGTT
AATAGAGGCC AACTTATAGG AGTTTTGTAT TTGGAAAATA ACCAAACTAC AGGTGCATTT
ACTCCAGAAT GTTGGGAAAT ATTAAGATTT TTATTATCTC AAGCAGCAGT TTCCTTAGAA
AATGCAATGT TGCACAGTTC AGCAGAAGAA AAAATACAAG AAACAACCGA AGAATTAAAC
GAAAAAAATT TACAACTAGA GCAAACATTA CAGGAGCTAC AACGCACTAA ATCTCAACTA
ATTAAAGGTG AAAAAATGTC AAGTTTAGGG CAGTTAGTTG CTGGAATAGC TCACGAAATT
AATAACCCTG TCGGCTTTAT TTATGGTAAT ATGTCCCCTG CCAATGAATA TATTTCTGAC
TTACTAAATT TGATTAATTT ATATCAAGAA CACTATCCTG AACCTGTAGA CGAGATTCAA
GATGAAATTG AAGATATGGA CTTAGAATTT CTTATAGAAG ACTTACAAAA ACTTTTGAAT
TCTATTAAAT TTGGAGCCGA ACGTATTCGA GATATTGTAA TTTCCATCCG CAACTTCTCG
CGCTTGGATG AAGCCAATAT GAATCCTATA AATATCCATG AAAATATTGA CAGTACCATA
CTAATTTTAA ATACTCGTAT TAAAGAAAAA TCAGATAAAA GTGAAATTAA AATAGTCAAA
AATTATGGTA GCTTACCAGA AGTTATCTGT TACGTTTCGC AAATTAATCA AGTATTTATG
AATTTACTAG CTAATGGAAT TGATGCTTTA GAAACTATGC GAGAAAAAAA ACAACAATTT
GACCGTCAAC CCACTATTAC AATTTCTACT GAAGTAACAG ATTTAGAAAC AGTAAAAATC
AAAATTTATG ACAATGGTAG TGGTATTAAT TCTGAAGCAT TATCTCAAAT ATTTGACCCA
TTTTTTACTA CTAAACCAGT GGGAGTAGGT ACAGGTTTAG GATTATCAAT TAGCCATTCA
ATTGTAGTAG AAAAACATGG GGGTAATTTG AGTTGTGTTT CTGAAGTTGG AAAAGGTACA
GAGTTCATAA TTGAAATTCC TATTAAACCA GCATCTAGTA ATTAG
|
|---|
| Protein sequence | MIQPENIENS SDKDMSNHSL NIATVIKVFQ AIYSEIVLDK LLSKLMKIIM ENTGAEKGVL
FLLTKGELIN RAEANLDSEA VVVQETQIHE CEDLPLTVIN YVERSRQDVV LSNAFAEDSF
TTDPYVVKVK LKSVLCTPIV NRGQLIGVLY LENNQTTGAF TPECWEILRF LLSQAAVSLE
NAMLHSSAEE KIQETTEELN EKNLQLEQTL QELQRTKSQL IKGEKMSSLG QLVAGIAHEI
NNPVGFIYGN MSPANEYISD LLNLINLYQE HYPEPVDEIQ DEIEDMDLEF LIEDLQKLLN
SIKFGAERIR DIVISIRNFS RLDEANMNPI NIHENIDSTI LILNTRIKEK SDKSEIKIVK
NYGSLPEVIC YVSQINQVFM NLLANGIDAL ETMREKKQQF DRQPTITIST EVTDLETVKI
KIYDNGSGIN SEALSQIFDP FFTTKPVGVG TGLGLSISHS IVVEKHGGNL SCVSEVGKGT
EFIIEIPIKP ASSN
|
|---|
| |