Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_3570 |
Symbol | |
ID | 4244319 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | + |
Start bp | 5488977 |
End bp | 5491328 |
Gene Length | 2352 bp |
Protein Length | 783 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 638108538 |
Product | signal transduction protein |
Protein accession | YP_723127 |
Protein GI | 113477066 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG5635] Predicted NTPase (NACHT family) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGGAAT GGTTAATTAC TTGGGGAGCT GGTAAAGCAG TTGAGTTTCT TGCTGAGAAA GTTATCGGAG AGTTAGTTAA GGGTGCTGCT GAAGACTACG TTAAAGATTT TTTTAAGCAA TGTTTTTCTA ATGCTATTAG CAACATAACA GAGAAAGAAC CTTTGCAAAA AGCTATGGCA GAAGCAACTA AAGAATTTTT AGAATTAGTA CAAAAAGAAT TAAAAGAAGT TGGCGTGGAT GAAAGTCAAT TAGAGCAGTA TATTAAACCC TTAGAAAAGT TTATTAAAAA TAAATCAGTT TTGGCAATTT TGGGTAGTGC TTTTGAGGAA AATATAACTC TAGATATTAA GCAATTAGCT ACTATTGGGA ATCAAATAAA CCCATCTTTT TTACCAGATG AATTTGACTG GGACTTAGTT ATCAGGCAAT ACCAGAGAAA AGTCAAAAAG ATTATTCAAA AATCAGATGA ATTACGGCAA ATATTAGATT CCAAATCTCT GGAAGAACTG GCAAGTCAAA CTTCAGTCAA ACCCGAATTT AACTTAATAA AACATCAAGA GGGAATTCGA GAAAGATATG GCAACCTCAG ATTAGACAGT TTAGATACTA AAGGTCTCGC TTATAACATC GAATTATTGA AAATTTTTAT TCCTCAAAAA GTACGGAAAA TTCAAGAATT TATACCTCAA ATTCATCTTA TGCCCAAACA ATATCAACAG CAATTAAAAG AGACTGGGCA GTTAGAAACA GCACTTTCTC AAGAACAATT AGAAAGTTTG GAGCGCCAAT ATTTTGAACA GCAGACTCGT TCAGTTTTAG AATTACAAAA AAACAAAGAA TATCAATATT TAGTAATCTT AGGTGACCCT GGTTCTGGTA AGTCTACTTT ATTAAGATAT ATAGCTCTTG AGTGGACAAA AATATTACCC AAAGATTTAC CTTTTCATCC AATTCCTATA CTAATTGAAC TGCAAACTTA TATGGGTAAT TATAATGAAA AAAAGTGTGA AAATTTTCTA GATTTCCTAG AAAAAGGTAG TGGAGTTATT TGTCATATCT CTCAAAAGGA ACTTCATAAC AAATTAAAAA AGGGTGAAGC TATTGTCATG TTTGATGGGT TAGATGAAGT TTTCGACCCT GAAAAACGAG AAAGGGTAAT AACTGATATT CATCGGTTTA CTAATGACTA TAAAAAGGTG CGAGTTATTG TTACTTCGCG GGTAATAGGT TATAAATTAC AAAGACTCCG AGATGCTGAA TTTTGTCATT TTATGTTGCA AGATTTAGAT GAGGAACAAA TTAATTATTT TATTAAAAAT TGGCATGAGC TTACTTACAA AAGTGAAGAA GAAGAGACAA AAAAGTGGAG AATGGGACGG TTAAAACAAG CAATTAAGGA TTTTTCAGCT ATTAAAGAAA TCGCTAGAAA TCCTCTATTA TTAACTATGA TGGCTATTAT GAATCGTAAT CAAGAACTTC CAAAATATAA AGCTGACCTC TATAATAATT CTTCAGAACT TTTGTTAAAG TGGGATGTAG AAAGGGCGCT TCGTAGAGAA GGGATGGAAC AAATTAATCT TGACTCTATA ACAATTAAAG ACAAGCAGGA AATATTGCGC CGGATGGCTA AGTTTATGCA GGAAAATAAA AAAGGTTTTG CTGGCAATTT AATCTCTGAG AATAATGTAG AAATAATTAT CAAAGAATAT CTAGATTTTC TAGGTTTTAA GGATGCAATA ATTATAGCTA GAGCCCTGCT TAAAGAGTTA CGCAATCGGA ATTTTATTTT ATGTTTTGTT GGGGGTGGAT ATTATGCTTT TGTACATCGA ACTTTTTTAG AATATTTCTG TGCCTGGAGT TTTGTTTGGG AGTTTAAGGA GACACAAACT ATAAACATAA ATCAGTTGAT AAATGATGTT TTTGAGAACC ATTGGCGGGA TGAAAATTGG CATGAAATTT TGCGATTAAT TGCAGGAAAG ATTAATGCTA ATTTTGTGGG AAAAATTATT GGTTATTTGA TGGAAAAAGA TGGGGAAGAA GAAAAATTTA TGAATTTATT TTTGGCGGGG AAATGTTTAT TTGAAGTTGA ACACCCTCAG CATATTGATG AGATAGCTTC TGAGTTATTG AATAGGTTAA AAGCTTTGAC AAATTATAAT CTTGATCATA TTGACTATGA TAGTAAAATT CGTACTCAAG CTGTAAAACT TGTGGCAGAA ACTTGGAGGG ATAATCGTTT AAATGAGGCT AATATTAAGA CTTGGCTCGA TAATATTGCA GAATCTCATA GTGATTTGAA TGTACGGGAG AGAGCAAAAG AAGAGTTAGC TACTAGATGG AAAAATGACT GA
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Protein sequence | MMEWLITWGA GKAVEFLAEK VIGELVKGAA EDYVKDFFKQ CFSNAISNIT EKEPLQKAMA EATKEFLELV QKELKEVGVD ESQLEQYIKP LEKFIKNKSV LAILGSAFEE NITLDIKQLA TIGNQINPSF LPDEFDWDLV IRQYQRKVKK IIQKSDELRQ ILDSKSLEEL ASQTSVKPEF NLIKHQEGIR ERYGNLRLDS LDTKGLAYNI ELLKIFIPQK VRKIQEFIPQ IHLMPKQYQQ QLKETGQLET ALSQEQLESL ERQYFEQQTR SVLELQKNKE YQYLVILGDP GSGKSTLLRY IALEWTKILP KDLPFHPIPI LIELQTYMGN YNEKKCENFL DFLEKGSGVI CHISQKELHN KLKKGEAIVM FDGLDEVFDP EKRERVITDI HRFTNDYKKV RVIVTSRVIG YKLQRLRDAE FCHFMLQDLD EEQINYFIKN WHELTYKSEE EETKKWRMGR LKQAIKDFSA IKEIARNPLL LTMMAIMNRN QELPKYKADL YNNSSELLLK WDVERALRRE GMEQINLDSI TIKDKQEILR RMAKFMQENK KGFAGNLISE NNVEIIIKEY LDFLGFKDAI IIARALLKEL RNRNFILCFV GGGYYAFVHR TFLEYFCAWS FVWEFKETQT ININQLINDV FENHWRDENW HEILRLIAGK INANFVGKII GYLMEKDGEE EKFMNLFLAG KCLFEVEHPQ HIDEIASELL NRLKALTNYN LDHIDYDSKI RTQAVKLVAE TWRDNRLNEA NIKTWLDNIA ESHSDLNVRE RAKEELATRW KND
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