Gene Tery_3570 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_3570 
Symbol 
ID4244319 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp5488977 
End bp5491328 
Gene Length2352 bp 
Protein Length783 aa 
Translation table11 
GC content32% 
IMG OID638108538 
Productsignal transduction protein 
Protein accessionYP_723127 
Protein GI113477066 
COG category[T] Signal transduction mechanisms 
COG ID[COG5635] Predicted NTPase (NACHT family) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGGAAT GGTTAATTAC TTGGGGAGCT GGTAAAGCAG TTGAGTTTCT TGCTGAGAAA 
GTTATCGGAG AGTTAGTTAA GGGTGCTGCT GAAGACTACG TTAAAGATTT TTTTAAGCAA
TGTTTTTCTA ATGCTATTAG CAACATAACA GAGAAAGAAC CTTTGCAAAA AGCTATGGCA
GAAGCAACTA AAGAATTTTT AGAATTAGTA CAAAAAGAAT TAAAAGAAGT TGGCGTGGAT
GAAAGTCAAT TAGAGCAGTA TATTAAACCC TTAGAAAAGT TTATTAAAAA TAAATCAGTT
TTGGCAATTT TGGGTAGTGC TTTTGAGGAA AATATAACTC TAGATATTAA GCAATTAGCT
ACTATTGGGA ATCAAATAAA CCCATCTTTT TTACCAGATG AATTTGACTG GGACTTAGTT
ATCAGGCAAT ACCAGAGAAA AGTCAAAAAG ATTATTCAAA AATCAGATGA ATTACGGCAA
ATATTAGATT CCAAATCTCT GGAAGAACTG GCAAGTCAAA CTTCAGTCAA ACCCGAATTT
AACTTAATAA AACATCAAGA GGGAATTCGA GAAAGATATG GCAACCTCAG ATTAGACAGT
TTAGATACTA AAGGTCTCGC TTATAACATC GAATTATTGA AAATTTTTAT TCCTCAAAAA
GTACGGAAAA TTCAAGAATT TATACCTCAA ATTCATCTTA TGCCCAAACA ATATCAACAG
CAATTAAAAG AGACTGGGCA GTTAGAAACA GCACTTTCTC AAGAACAATT AGAAAGTTTG
GAGCGCCAAT ATTTTGAACA GCAGACTCGT TCAGTTTTAG AATTACAAAA AAACAAAGAA
TATCAATATT TAGTAATCTT AGGTGACCCT GGTTCTGGTA AGTCTACTTT ATTAAGATAT
ATAGCTCTTG AGTGGACAAA AATATTACCC AAAGATTTAC CTTTTCATCC AATTCCTATA
CTAATTGAAC TGCAAACTTA TATGGGTAAT TATAATGAAA AAAAGTGTGA AAATTTTCTA
GATTTCCTAG AAAAAGGTAG TGGAGTTATT TGTCATATCT CTCAAAAGGA ACTTCATAAC
AAATTAAAAA AGGGTGAAGC TATTGTCATG TTTGATGGGT TAGATGAAGT TTTCGACCCT
GAAAAACGAG AAAGGGTAAT AACTGATATT CATCGGTTTA CTAATGACTA TAAAAAGGTG
CGAGTTATTG TTACTTCGCG GGTAATAGGT TATAAATTAC AAAGACTCCG AGATGCTGAA
TTTTGTCATT TTATGTTGCA AGATTTAGAT GAGGAACAAA TTAATTATTT TATTAAAAAT
TGGCATGAGC TTACTTACAA AAGTGAAGAA GAAGAGACAA AAAAGTGGAG AATGGGACGG
TTAAAACAAG CAATTAAGGA TTTTTCAGCT ATTAAAGAAA TCGCTAGAAA TCCTCTATTA
TTAACTATGA TGGCTATTAT GAATCGTAAT CAAGAACTTC CAAAATATAA AGCTGACCTC
TATAATAATT CTTCAGAACT TTTGTTAAAG TGGGATGTAG AAAGGGCGCT TCGTAGAGAA
GGGATGGAAC AAATTAATCT TGACTCTATA ACAATTAAAG ACAAGCAGGA AATATTGCGC
CGGATGGCTA AGTTTATGCA GGAAAATAAA AAAGGTTTTG CTGGCAATTT AATCTCTGAG
AATAATGTAG AAATAATTAT CAAAGAATAT CTAGATTTTC TAGGTTTTAA GGATGCAATA
ATTATAGCTA GAGCCCTGCT TAAAGAGTTA CGCAATCGGA ATTTTATTTT ATGTTTTGTT
GGGGGTGGAT ATTATGCTTT TGTACATCGA ACTTTTTTAG AATATTTCTG TGCCTGGAGT
TTTGTTTGGG AGTTTAAGGA GACACAAACT ATAAACATAA ATCAGTTGAT AAATGATGTT
TTTGAGAACC ATTGGCGGGA TGAAAATTGG CATGAAATTT TGCGATTAAT TGCAGGAAAG
ATTAATGCTA ATTTTGTGGG AAAAATTATT GGTTATTTGA TGGAAAAAGA TGGGGAAGAA
GAAAAATTTA TGAATTTATT TTTGGCGGGG AAATGTTTAT TTGAAGTTGA ACACCCTCAG
CATATTGATG AGATAGCTTC TGAGTTATTG AATAGGTTAA AAGCTTTGAC AAATTATAAT
CTTGATCATA TTGACTATGA TAGTAAAATT CGTACTCAAG CTGTAAAACT TGTGGCAGAA
ACTTGGAGGG ATAATCGTTT AAATGAGGCT AATATTAAGA CTTGGCTCGA TAATATTGCA
GAATCTCATA GTGATTTGAA TGTACGGGAG AGAGCAAAAG AAGAGTTAGC TACTAGATGG
AAAAATGACT GA
 
Protein sequence
MMEWLITWGA GKAVEFLAEK VIGELVKGAA EDYVKDFFKQ CFSNAISNIT EKEPLQKAMA 
EATKEFLELV QKELKEVGVD ESQLEQYIKP LEKFIKNKSV LAILGSAFEE NITLDIKQLA
TIGNQINPSF LPDEFDWDLV IRQYQRKVKK IIQKSDELRQ ILDSKSLEEL ASQTSVKPEF
NLIKHQEGIR ERYGNLRLDS LDTKGLAYNI ELLKIFIPQK VRKIQEFIPQ IHLMPKQYQQ
QLKETGQLET ALSQEQLESL ERQYFEQQTR SVLELQKNKE YQYLVILGDP GSGKSTLLRY
IALEWTKILP KDLPFHPIPI LIELQTYMGN YNEKKCENFL DFLEKGSGVI CHISQKELHN
KLKKGEAIVM FDGLDEVFDP EKRERVITDI HRFTNDYKKV RVIVTSRVIG YKLQRLRDAE
FCHFMLQDLD EEQINYFIKN WHELTYKSEE EETKKWRMGR LKQAIKDFSA IKEIARNPLL
LTMMAIMNRN QELPKYKADL YNNSSELLLK WDVERALRRE GMEQINLDSI TIKDKQEILR
RMAKFMQENK KGFAGNLISE NNVEIIIKEY LDFLGFKDAI IIARALLKEL RNRNFILCFV
GGGYYAFVHR TFLEYFCAWS FVWEFKETQT ININQLINDV FENHWRDENW HEILRLIAGK
INANFVGKII GYLMEKDGEE EKFMNLFLAG KCLFEVEHPQ HIDEIASELL NRLKALTNYN
LDHIDYDSKI RTQAVKLVAE TWRDNRLNEA NIKTWLDNIA ESHSDLNVRE RAKEELATRW
KND