Gene Tery_3564 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_3564 
Symbol 
ID4244313 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp5480746 
End bp5481531 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content36% 
IMG OID638108532 
Productexodeoxyribonuclease III 
Protein accessionYP_723121 
Protein GI113477060 
COG category[L] Replication, recombination and repair 
COG ID[COG0708] Exonuclease III 
TIGRFAM ID[TIGR00195] exodeoxyribonuclease III
[TIGR00633] exodeoxyribonuclease III (xth) 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATAG CTACTTGGAA TGTAAATTCA ATTCGCACTC GTAAACAACA AGTGATAGAA 
TGGCTAAAAG CAAACTCTGT TGACATTCTC TGTTTGCAAG AAACTAAGGT TATTGACCAA
GATTTTCCGC GATCGCCTTT TGCAGAATTA GGCTACCATA TTTATGTTTC TGGTCAGAAA
TCTTACAATG GCGTGGCAAT TTTTAGTCGT TCCCCAATGG AAGATATTAG TAGTGGTTTT
GCACCTATTT TAGGTGATCA TAAAGTAGGA GATTTTGACA TACAGAAACG GTTAATTACT
GGGGTAATAA ATGATGTTCG TATTCTTAAT CTTTATGTTC CCAATGGTTC TAGTGTCGGT
AGTGAAAAAT ATGATTACAA ACTTGATTGG TTAAAATTGT TGCAAGAATA TGTAAAAATA
ATTCTTGACA AATCGCCTAA TTTATGTATT TGTGGAGATT TTAATATTGT CCCAGAAGAC
CGGGATATTT ACGACCCAGA AGGTTGTAAA AATTCTGTAG GATTATCTGA TCTCGAACGC
CAAGCTTTAC AAGAAATTCT CAAATTAGGA TTAGTCGATG CCTTTCGCCA ATTTACCACC
GAAGGAGGTC ATTACAGTTG GTGGGATTAT AGAGCAGCAG GTTTTCGCCG TAATCGTGGT
TGGCGTATTG ACCATCATTA TCTTAGTTTA CCCCTTTCTC AAAAAGCAAC AATGTGTGTA
ATAGATAAGA ATCCAAGAGA GTTACTAAAA CCTAGTGACC ATGCACCAGT TATTGTAGAA
TTTTGA
 
Protein sequence
MKIATWNVNS IRTRKQQVIE WLKANSVDIL CLQETKVIDQ DFPRSPFAEL GYHIYVSGQK 
SYNGVAIFSR SPMEDISSGF APILGDHKVG DFDIQKRLIT GVINDVRILN LYVPNGSSVG
SEKYDYKLDW LKLLQEYVKI ILDKSPNLCI CGDFNIVPED RDIYDPEGCK NSVGLSDLER
QALQEILKLG LVDAFRQFTT EGGHYSWWDY RAAGFRRNRG WRIDHHYLSL PLSQKATMCV
IDKNPRELLK PSDHAPVIVE F