| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_3540 |
|---|
| Symbol | |
|---|
| ID | 4244289 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Trichodesmium erythraeum IMS101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008312 |
|---|
| Strand | + |
|---|
| Start bp | 5454517 |
|---|
| End bp | 5455338 |
|---|
| Gene Length | 822 bp |
|---|
| Protein Length | 273 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 638108511 |
|---|
| Product | response regulator receiver protein |
|---|
| Protein accession | YP_723100 |
|---|
| Protein GI | 113477039 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1117] ABC-type phosphate transport system, ATPase component |
|---|
| TIGRFAM ID | [TIGR00972] phosphate ABC transporter, ATP-binding protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTAGAGC ATCAAACAAA TACTTATCAA CAGAATTCTA CTCCTGCTCT TTCAGCAGAA
AACCTTAGCA TTTTTTATGG TGATTTTAAA GCCCTAAAAG ATATTTCAAT GAGAATTCCT
AAGAATAAAG TAACTGCTTT TATCGGACCT TCAGGTTGTG GTAAAAGTAC ATTATTACGA
TGCTTTAATC GTCTCAATGA TTTGATTGAT ATTTTCCGCT TAGAAGGTCG TATTCTTTAT
CATAATCAAA ATATTTACGA CCCAGATATT GACCCTGTAG AAATTCGCCG TCACATCGGT
ATGGTTTTTC AAAAACCCAA TCCTTTTCCT AAGTCAATTT ACGATAACAT TGCTTATGGA
GTAAGAGTGA ATGGTTTGGC TAAATCTAAA GAAGAAATGG ATGAGATAGT CGAGCGATCG
CTAAGGCAAG CAGTTTTATG GGATGAGGTC AAGGATAAAT TAGGACAAAG TGGTTTTGCT
CTATCTGGAG GTCAACAACA ACGTTTGTGT ATTGCTCGTG CAGTTGCTAT TAGTCCAGAT
GTAGTTTTAA TGGATGAACC TTGTGCTTCC CTGGATCCTA TTTCAACTGT GAAAGTAGAA
GAGTTAATTA ACGAACTCAG GCAAAAATAT ACTATTATTA TAGTGACTCA TAATATGCAG
CAAGCTACTC GGATAGCTGA CTTAACTGCT TTTTTTAATG CCAAAGCTGT AGAAAGTGGC
CAACGTTTTG GTTATTTGGT TGAATTTGAT AAAACTAACA ATATTTTTCA AAACCCAAGG
GAAAAAGCCA CTCAAGATTA TGTAAGTGGT CGTTTTGGCT AA
|
|---|
| Protein sequence | MLEHQTNTYQ QNSTPALSAE NLSIFYGDFK ALKDISMRIP KNKVTAFIGP SGCGKSTLLR
CFNRLNDLID IFRLEGRILY HNQNIYDPDI DPVEIRRHIG MVFQKPNPFP KSIYDNIAYG
VRVNGLAKSK EEMDEIVERS LRQAVLWDEV KDKLGQSGFA LSGGQQQRLC IARAVAISPD
VVLMDEPCAS LDPISTVKVE ELINELRQKY TIIIVTHNMQ QATRIADLTA FFNAKAVESG
QRFGYLVEFD KTNNIFQNPR EKATQDYVSG RFG
|
|---|
| |