| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_3525 |
|---|
| Symbol | |
|---|
| ID | 4244351 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Trichodesmium erythraeum IMS101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008312 |
|---|
| Strand | - |
|---|
| Start bp | 5432786 |
|---|
| End bp | 5433997 |
|---|
| Gene Length | 1212 bp |
|---|
| Protein Length | 403 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 638108498 |
|---|
| Product | aminotransferase |
|---|
| Protein accession | YP_723087 |
|---|
| Protein GI | 113477026 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACAAAC AAAAACAATC AAAATCCCAT TTTATTGCAC CTAAATTACT CAAAACAATA
GAACATGAAA CACCAATGAG CAAATTCTAT AGAACAGCAA CTTATATGAG TCGAATAAAC
GAAGCAGGTA ATATTAATTT AATTTTGGGA GATTCTCATG AAATGCCTTT ACCTGGATTT
GTTGAAGCTT TACAAAAGAA TGCAATAGCG AGTAAAATAG GGTATTATGG CTATAAAATG
AATTTACCTG AAACTAGAAA AATTGTCTCT CAGGCACTAA AAAAACATAG AGGAATATCT
ATTTTACCTG ATGATATTTT TATGACAAAT GGTACAGTTA TCGGTTTAGC AATATGTTTA
AAACTATTAG TTCAAGAAGG GGATGAAGTG ATTATTAATC TTCCTCCCTG GTTAGGCTAT
CGCGGAATGA TTAATGCAGT AGGTGCTAAA TCTGTGGGCA TTCCAGTCAT GGCTAAAACC
TTTGATTTAG ACCTAGAAAA AATCGCAAAT TCTATTACAG AAAGAACTCG CGCTATTCTA
ATTAATTCCC CTCATAATCC AACAGGTAAA ATATTATCTG AAAAAACATT AGAGAATTTA
GGTAATTTAT TAACTGAAGC TTCTAAAAAT TATGGCAAAC CAATTTATTT AATTTCTGAT
GAAACATTTA GTCGTGTTGT TTTTAATCAT CAAAATTGCC CGAGTCCGAC ACAATTTTAT
CCCCTTTCTT TTTTAGTATA TAGTTATAGC AAGACTTGGA TAGCTCCTGG TCAAAGAATA
GGTTATATTG CTCTTCCTGA AACTATGCCA GAACGTGAAC AGATCAGAAA TTTAATTGGT
CGATTACAAA CCTTATATTT TGGTTGGTGT TTTCCTAGTG CCCTAATGCA ATATGCCTTA
GAAGATTTGG AAAATTTAAA ACTAAATATT AAACATTTAC AAGATAAAAG GGATTGGATA
ATTCAAGAAT TACAGAAAAT TGGATATGAA GTAAACGTAC CACAGGGAAC CTTCTTCTTA
TTAGTAAAAT CTCCTTATAA AGATGACTGT GCTTTTGCCG AATTATTAAC TAACTATGGA
GTATTTGTTT TGCCAGGAAC TCCCCAAGAA ATTCCTGGTT ATTTTCGGAT ATCTTTGACA
GCAAATAAAG ATATGCTTAC TCAAGCATTG CCAAAATTTA AATTAGCTAG AGAACAAGCA
ATTATGACCT AA
|
|---|
| Protein sequence | MNKQKQSKSH FIAPKLLKTI EHETPMSKFY RTATYMSRIN EAGNINLILG DSHEMPLPGF
VEALQKNAIA SKIGYYGYKM NLPETRKIVS QALKKHRGIS ILPDDIFMTN GTVIGLAICL
KLLVQEGDEV IINLPPWLGY RGMINAVGAK SVGIPVMAKT FDLDLEKIAN SITERTRAIL
INSPHNPTGK ILSEKTLENL GNLLTEASKN YGKPIYLISD ETFSRVVFNH QNCPSPTQFY
PLSFLVYSYS KTWIAPGQRI GYIALPETMP EREQIRNLIG RLQTLYFGWC FPSALMQYAL
EDLENLKLNI KHLQDKRDWI IQELQKIGYE VNVPQGTFFL LVKSPYKDDC AFAELLTNYG
VFVLPGTPQE IPGYFRISLT ANKDMLTQAL PKFKLAREQA IMT
|
|---|
| |