Gene Tery_3485 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_3485 
Symbol 
ID4244485 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp5365210 
End bp5365992 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content39% 
IMG OID638108459 
Producthypothetical protein 
Protein accessionYP_723048 
Protein GI113476987 
COG category[L] Replication, recombination and repair 
COG ID[COG1943] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.36702 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCAGAA AACCTCGAAA TCTTTTAGCT GGATACTCCT ATCACATTAC GACTCGTTGC 
AATAACCGTG AATTTAAACT TTCACGGCGC CAATGTCGGG AGGTATTTCT TTATGCTATT
AAAAAGGTTT CCACAAAATA CAATTTTCGG CTTTATGCAT TGTGCATTAT GTCTAATCAT
GTTCATTATT TGATTGAACC CTTACAACCA GAAGATTTAC CGAAAATCAT GCACTTCCTC
AACTGGTATA CGGCTATGTG TTTCAACAGA ATGTTAAAAC GTACAGGGCA TTTTTGGGAA
AAACGATATT ACTCTAATGG GTTTCCTTCC TCAGATAAAG AAAGAGCATT GAATACTTTG
CGTTACATTC ATGGCAACCC TAAAGCTGCC AAAATGCGTT GCGGCTTTTT CTACGACTTT
AGCAACTATG GTAGCTACGA ATGTTTGACT AATGATGGCC TAACTCAATG GCATCCTGCT
TTCTTGGAGT TAGCTAACAC TCTGGAAGAA TGTGCACAAA AATATAAGGG ATTTTGTCGT
AAATATAAGC CCAAACAAAA AAAAGGAAAA AAGTGTCACT GGGGTAGTAA GTTTTTAGGG
GGTATTGTTC TGTCTTTTGA TGGCAGAAAT TCTCGTTCTA CGAAGAAGAA CTCTACAAAA
AAGAAGGAGT CAACCCTCTT TGACTTTCCG CCGACGGTAA TGCCGGAGGA AAATAAAGAA
ATAGCAAGGG TAGTTAGTCA ATTTGTTGTA GCCAATAGAC CCTCAGTCAG ATGGGGGGGG
TAA
 
Protein sequence
MPRKPRNLLA GYSYHITTRC NNREFKLSRR QCREVFLYAI KKVSTKYNFR LYALCIMSNH 
VHYLIEPLQP EDLPKIMHFL NWYTAMCFNR MLKRTGHFWE KRYYSNGFPS SDKERALNTL
RYIHGNPKAA KMRCGFFYDF SNYGSYECLT NDGLTQWHPA FLELANTLEE CAQKYKGFCR
KYKPKQKKGK KCHWGSKFLG GIVLSFDGRN SRSTKKNSTK KKESTLFDFP PTVMPEENKE
IARVVSQFVV ANRPSVRWGG