| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_3484 |
|---|
| Symbol | |
|---|
| ID | 4244484 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Trichodesmium erythraeum IMS101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008312 |
|---|
| Strand | + |
|---|
| Start bp | 5363121 |
|---|
| End bp | 5364986 |
|---|
| Gene Length | 1866 bp |
|---|
| Protein Length | 621 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 638108458 |
|---|
| Product | FtsH-2 peptidase |
|---|
| Protein accession | YP_723047 |
|---|
| Protein GI | 113476986 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0465] ATP-dependent Zn proteases |
|---|
| TIGRFAM ID | [TIGR01241] ATP-dependent metalloprotease FtsH |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCATTA AAAAGAATTC CAAAAATTCC CGTAACCGTA AAATTGGAAC TGTTTTATTA
ATTTTGGCAG GTGTGTTATT AGCAGTATAC TTCTTCATGC CACGTCGCAA ATATCCTCGT
GTTCCTTATA GTGTATTTAT TCAACAAGTG GAAAAAGGAC AAGTGGTGGG AGTTCAAATA
GATAACAAAA AAATTGTATA TCGCCTCAAA GGAGAAGAAG ATCAACTCGG ACCTTTACTT
GTCACTACTA CAATAAATGA TCCTCAATTA CTTAAGCGTT TAGAAGATAA TAAAGTTACA
TTTCAAGCCG CACTCCCGAA AAGTCCTTGG TTTACTATTC TTTTAAATTG GGTAATTCCA
CCAATTATAT TAGTAGCAGC ATTTCAGTTT TTTATGAACC GTGGAACTCA AGGTTCTCTT
TCAATTAGTA AGAGTAAAGC TAAAGCTTAT GTGGAGGGAG AATCAGAAAA AATTACTTTT
GCTGATATCG CTGGGGTGGA AGAAGCAAAG ACAGAATTAA CTGAAATTGT AGATTTCTTA
AAAACACCAA AATGTTTTAC TGAAATTGGT GCGAGAATTC CTAAAGGTTT GTTATTAGTC
GGACCTCCGG GAACTGGTAA AACTTTATTA TCAAAAGCAG TTGCTGGAGA AGCCGGAGTG
CCATTTTTTA GTATTTCTGG TTCGGAGTTT GTGGAACTAT TTGTTGGTAC TGGTGCTGCT
AGAGTTCGTG ATTTGTTTAA ACAGGCAAAA AAGAAGGCTC CTTGTATTAT TTTTATTGAT
GAAATAGATG CAATTGGTAA GTCGAGAACT AGTGGCAATT TTTACAGTGG TGGTAATGAT
GAACGGGAAC AAACTTTAAA TCAACTGTTA GCTGAAATGG ATGGTTTTGG AGCAGGAGAT
TTAACGGTTA TTGTTTTAGC CGCGACTAAC AGACCGGAAG CTTTAGATGC TGCTTTATTG
CGTCCGGGAA GATTTGATAG ACAGGTATTA GTAGACCGTC CAGACTTAGT TGGTCGGGAG
GCAATTTTAA ATATTTATGC TAAAAAAGTT AAGTTGGGAG AAGATGTTGA TGTGCATAAA
ATAGCAGTTA GAACTCCTGG TTTTGGAGGG GCAGACTTAG CTAATATTGT GAATGAAGCT
GCTTTATTAG CGGCCAGAAA TAAACGGGAA ACTGTTGCAC AAGTAGATTT TTCCGAAGCT
ATTGAAAGAG TGGTTGCTGG TTTGGAAAAA AGGAGTCGGG TTTTGAGCGA TCGCGAAAAG
AAAATTGTAG CTTATCATGA AGTTGGTCAT GCTTTGGTTG CGGCGTTAAT GCCTGGTAGT
GGTAAGGTGG AAAAAATTTC AATTGTACCG AGGGGAATGG CTGCTTTGGG GTATACTTTG
CAGTTGCCAA CTGAGGAGAG ATTTTTAAGA GATGAAACTG AAATTCGAGG GCAAATTGCT
ACTTTTTTAG GAGGTCGTGC TGCGGAGGAA ATTGTCTTTG GAAGTATTAC GACTGGAGCT
TCAGGAGATT TACAAAAAGC TACAGATCTT GCTGAACAAA TGGTGACAAC TTATGGTATG
AGTAAGGTTT TAGGACCTTT GGCTTATGAA CGCCGTGGTC AAGGAGGATT TTTAAGCAAT
GAAGGTGTTA ACCCCCGTCG TTTAGTTAGT GAAAAAACTG CCGAAGCAAT TGATAATGAA
GTGAAAGAAA TTGTGGAAAA GGCTCATCAG CAAGCTAGGG AAATTTTGAA TTATAATCAA
GGTTTGCTCC AAAAGATTTC TCAGTATATT TTGGAAAAAG AAGTCATAGA AGGAGGAGAG
TTATATGGGT TATTGGAAGA GGTGCGAACG CCACCAAGGA AGGATGTTAA AGAAGTCGAA
AGTTAA
|
|---|
| Protein sequence | MSIKKNSKNS RNRKIGTVLL ILAGVLLAVY FFMPRRKYPR VPYSVFIQQV EKGQVVGVQI
DNKKIVYRLK GEEDQLGPLL VTTTINDPQL LKRLEDNKVT FQAALPKSPW FTILLNWVIP
PIILVAAFQF FMNRGTQGSL SISKSKAKAY VEGESEKITF ADIAGVEEAK TELTEIVDFL
KTPKCFTEIG ARIPKGLLLV GPPGTGKTLL SKAVAGEAGV PFFSISGSEF VELFVGTGAA
RVRDLFKQAK KKAPCIIFID EIDAIGKSRT SGNFYSGGND EREQTLNQLL AEMDGFGAGD
LTVIVLAATN RPEALDAALL RPGRFDRQVL VDRPDLVGRE AILNIYAKKV KLGEDVDVHK
IAVRTPGFGG ADLANIVNEA ALLAARNKRE TVAQVDFSEA IERVVAGLEK RSRVLSDREK
KIVAYHEVGH ALVAALMPGS GKVEKISIVP RGMAALGYTL QLPTEERFLR DETEIRGQIA
TFLGGRAAEE IVFGSITTGA SGDLQKATDL AEQMVTTYGM SKVLGPLAYE RRGQGGFLSN
EGVNPRRLVS EKTAEAIDNE VKEIVEKAHQ QAREILNYNQ GLLQKISQYI LEKEVIEGGE
LYGLLEEVRT PPRKDVKEVE S
|
|---|
| |