Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_3461 |
Symbol | |
ID | 4244461 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | + |
Start bp | 5296620 |
End bp | 5299337 |
Gene Length | 2718 bp |
Protein Length | 905 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 638108437 |
Product | DSH-like |
Protein accession | YP_723026 |
Protein GI | 113476965 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4581] Superfamily II RNA helicase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCATACT CAACCCAGAA CAGCCAAGAG CTGGCTCTGA AGACCTTATT TCCATTTCAA TTAGATGAAT TCCAGAAACA AGCGATCGCT GCCCTAAACG CTGGAAAATC AGTAGTCGTT TGTGCCCCCA CAGGTTCAGG CAAAACCCTA ATTGGAGAAT ATGCCATTTA CCGGGCCTTA AGTCGTGGAC AACGAGTATT CTATACCACA CCTCTCAAAG CCCTATCAAA CCAGAAATTG CGGGACTTCC GCAAATTATT TGGGCCAGAA AAAGTGGGCT TAGTGACAGG AGATACATCC GTCAACCGGG AAGCATCAGT TCTAGTGATG ACTACAGAAA TATTCCGCAA TATGCTCTAT GGTACTCACA TTGGAGAAGT AGGCGCATCC TTAGAAAAAG TAGAAGCAGT AGTTTTAGAC GAATGCCACT ACATGAATGA TCGCCAGCGA GGCACGGTCT GGGAAGAATC AATAATTTAC TGCCCGCCAG AAATCCAACT ATTAGCCCTC TCCGCTACAG TAGCTAATAG CGATCAACTC ACAGACTGGA TTCTCAGAGT ACATGGGCCG ACGGAATTAA TTTACTCTGA TTTTCGACCA GTCCCTCTGA AATTTAATTT CTCCAATAGT AAAGGCTTAT TTTCTTTACT CAATAGTAAT CAAAAAAGAA TCAATCCTCA ACTTAAGCCT AAAAGTAGAC AACCAAAAAC AGACAAAAAA GATAAAAAAG AAGAACCAGC CCTATCAACA GTATTATCTC AGCTCCAAGA GCGAGATATG TTACCAGCCA TCTACTTCAT ATTCAGCCGT AGAGGATGCG CTCGTGCTGT AGCAGAAATA GCACAACTGA GCAATCTCAC CTTAGTGAAC CCAGAAGAAG CGGCTAAACT ACAAAAACTA GTTCAGAAAT TTCTCCAGCG CAACCCAGAT CTAGGGAAAT CTCAACAGTT AGAACCTCTC ACTAGAGGAA TAGCAGCTCA CCATGCCGGA ATGTTACCAG TCTGGAAAGG ATTAGTTGAG GAATTATTTC AGCAAGGTTT AATCAAAGTA GTATTTGCTA CCGAAACCTT GGCTGCAGGA ATAAACATGC CAGCTCGTAC AACTGTTATC TCCAGTCTCT CAAAACGCAC AGATGATGGG CACCGACTCC TAAAACCATC AGAATTTCTG CAAATGGCAG GTAGGGCAGG ACGACGAGGG ATGGATATTC AAGGTTATGT TGTAACTGTA CAAACTAGGT TTGAGGGGGT CAAAGAGGCA GCTTATTTGG CAACTTCAGG AGCTGACCCC CTGGTGAGCC AGTTTACTCC TAGCTATGGT ATGGTGCTGA ATTTACTACA AACTCATACT TTGCAGGAGG CAAAAGATTT AGTAGAACGT AGTTTTGGTC AGTATTTGTC TACCCTATCT TTATTGCCAG AGAGAAAAGA AATTGAACTC AAGGAAAAGG AGTTGAAAGC TCTAGAAAAT AAACTGGGAA TTTATGAAGA TAATGATTGG ATTAATCTTG AACAACTACT GGCTAGTTAT GAAAAGTTAC GGGGAAAAGT CAAAGAGGAG AAACGACTAC TGAGGATTTT GCAAAGGCAG GCAGAGGAAA CTCGAATTAG GGAAATGTCT TTGTCTTTGT CTTTTGCAAT TTTGGGAACT GTGCTTAGTT TGAAAGGAAA GCATGTTCCT ACTGCGAAAA AGTCTACTGC AGAACCTATT CCAGCCGTGT TAGTAGCAAA AGTTCCTGGT TCTGGTCAGT CTTCTTATTC CTTGTGTTTG GGTAAGGATA ATCGATGGTA TATAGTAGGA GCAATGGATG TAATGACTTT GCAGGCGGAC TTCCCTCGGT TGGCTGCTGT GGACTACATG GAAGTCCCTG AAGAGATGGG TTCTCGTTTA GGTCAATGTC GCAAGGGAGA TGAAATTTCT CTGGTTTTGG CTCAACAAAT TCCAGCGGTA CCGCTTCCGG TAGATCCTCC AGAAGTTTTA GCACAAATGC AGAAACTGGC AATATGTGAA GCAGAAGCTG AGGCACACCC TCTGAAGGAG TGGGGGAACC CTCGTACTCT GATCAAGGGT TGGCGACGGG TAGAAATGTT GAGGGCTGAA ATAGAGGATC GCCAGAGAGA GTTGGAGGAT AAGTTAGCAC GTCACTGGCA AGAGTTTCTC CATCTAATTG AAATTTTGCA ATATTTTGGC TGTCTCCATG GGGTCGAGCC GACTGAGGTT GGTCAAGCTT GTGCGGCAAT TCGGGGTGAT AATGAATTAT GGCTTGGTTT GGTCTTGATG TCTGGATCTT TTGACGAACT TGACCCACAC CATTTGGCTA CTGCTTGTGC TGGTCTGGTG ACAGAGATTA CTAGACCTGA TAGTTGGACT CGTTATGAGT TGTCTGTTGA GGTGAAGGAG GCAATGGCAA GTTTGCGCAA TTTACGACAT CAGTTATTTC AGGTGCAGCA TCGGCATCAG GTGGCTTTGC CTGTCTGGTT GGAGCGGGAT TTGATTGCTT TGGTTGAACA GTGGGCTTTG GGAGTGGAAT GGGAGGAGCT AGTAAACAAT GCAAGTCTTG ATGAGGGTGA TGTTGTCCGG ATGTTACGTC GGACTTTGGA TTTTTTGTCT CAGATTCCTC ATGTGCCTTG TTTGTCGGAT GCTTTACGAC GGAATGCTCA TCGTGCTATG CAGTTGATTG ATCGTTTCCC TGTGAATGAA GTGGTTGAAC CAGAATAA
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Protein sequence | MSYSTQNSQE LALKTLFPFQ LDEFQKQAIA ALNAGKSVVV CAPTGSGKTL IGEYAIYRAL SRGQRVFYTT PLKALSNQKL RDFRKLFGPE KVGLVTGDTS VNREASVLVM TTEIFRNMLY GTHIGEVGAS LEKVEAVVLD ECHYMNDRQR GTVWEESIIY CPPEIQLLAL SATVANSDQL TDWILRVHGP TELIYSDFRP VPLKFNFSNS KGLFSLLNSN QKRINPQLKP KSRQPKTDKK DKKEEPALST VLSQLQERDM LPAIYFIFSR RGCARAVAEI AQLSNLTLVN PEEAAKLQKL VQKFLQRNPD LGKSQQLEPL TRGIAAHHAG MLPVWKGLVE ELFQQGLIKV VFATETLAAG INMPARTTVI SSLSKRTDDG HRLLKPSEFL QMAGRAGRRG MDIQGYVVTV QTRFEGVKEA AYLATSGADP LVSQFTPSYG MVLNLLQTHT LQEAKDLVER SFGQYLSTLS LLPERKEIEL KEKELKALEN KLGIYEDNDW INLEQLLASY EKLRGKVKEE KRLLRILQRQ AEETRIREMS LSLSFAILGT VLSLKGKHVP TAKKSTAEPI PAVLVAKVPG SGQSSYSLCL GKDNRWYIVG AMDVMTLQAD FPRLAAVDYM EVPEEMGSRL GQCRKGDEIS LVLAQQIPAV PLPVDPPEVL AQMQKLAICE AEAEAHPLKE WGNPRTLIKG WRRVEMLRAE IEDRQRELED KLARHWQEFL HLIEILQYFG CLHGVEPTEV GQACAAIRGD NELWLGLVLM SGSFDELDPH HLATACAGLV TEITRPDSWT RYELSVEVKE AMASLRNLRH QLFQVQHRHQ VALPVWLERD LIALVEQWAL GVEWEELVNN ASLDEGDVVR MLRRTLDFLS QIPHVPCLSD ALRRNAHRAM QLIDRFPVNE VVEPE
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