| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_3441 |
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| Symbol | valS |
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| ID | 4243384 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Trichodesmium erythraeum IMS101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008312 |
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| Strand | - |
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| Start bp | 5260963 |
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| End bp | 5263698 |
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| Gene Length | 2736 bp |
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| Protein Length | 911 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 638108417 |
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| Product | valyl-tRNA synthetase |
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| Protein accession | YP_723007 |
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| Protein GI | 113476946 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0525] Valyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00422] valyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAAGAA GCATACCAGA ACTACCAACA AAATACGACC CCTTTGTCAC TGAAGCTAAA
TGGCAGAGAT ATTGGGAAGA AAACAATACT TTCAAAGCAG ACCCTAAGCA AGCAGGCGAC
CCCTACTGCA TAGTCATTCC TCCACCAAAT GTTACAGGTA GTCTCCATGC AGGCCATGCT
TTCAATAATT CTCTTATTGA TGCCCTTATC CGTTACCATC GGATGCGTGG TGACAATACC
CTCTACCTCC CAGGCACAGA TCACGCTAGT ATCGCAGTTC AAACTATTCT GGAACGCAAA
CTCAAAGCGG ATGGCCAAAC TCGCTACGAT GTCGGGCGGG AAAAATTTCT CAAACTTGCC
TGGGAATGGA AAGCAGAGTC TGGTGGCACT ATTGTTAATC AACTGCGTCG CTTAGGAGTT
TCTACAGACT GGACACGGGA ACGTTTTACC CTGGATGAAG GCTTATCAAA AGCTGTCATT
GAGGCATTCA TGCGTCTCTA CGAACAAGGT CTCATCTATC GTGGTAATTA TTTGGTCAAC
TGGTGTCCGG CTAGTCAGTC TGCTGTTTCT GACTTAGAGG TAGAAAATAA AGAAGTTAAT
GGGAACCTCT GGCATTTCCG TTATCCTCTC ACTGATGGCA GTGGTTATGT GGAAGTCGCT
ACTACTCGCC CAGAAACAAT GTTGGGAGAT ACTGGTGTTG CTGTTAACCC TAATGACGAT
CGCTACAAAG ATATTATCGG CAAAACTGTT ATGCTACCAA TAATGAAACG GGAAATACCT
ATTATTGCTG ATGAGTTGGT TGATCCTGAG TTTGGTACTG GTTGTGTTAA AGTTACTCCC
GCTCACGACC CTAATGATTT TGAAATGGGT AAACGTCATA ACTTGCCGTT AATCAATATT
ATGAATAAAG ATGGTAGCTT GAATGAAAAT GCGGGAGTGT TTGTTGAGCA AGACCGTTTT
GAGGCGCGGA AAAATGTTGT CCAACGGTTA AAGGAAGAAG GGGTTTTAGT AAAAGTAGAA
GATTATAGTC ATAGTGTTCC CTATAGTGAT CGTGGCAAAG TACCTGTAGA ACCACTGCTC
TCAACTCAGT GGTTTGTTAA AATTAAACCC TTGGCGGAGA AAACACTGGA ATTATTGGAT
AGGCACAACC AACCCAAATT TGTTCCTGAA CGTTGGACGA AAGTTTATCG CGACTGGTTG
GTAAAAATTC AAGACTGGTG TATTTCCCGA CAACTCTGGT GGGGTCATCA AATTCCGGCT
TGGTATGTTA TTAGTGAAAC TAATGGAGAA ATTGCCGATA ATACTCCTTT TGTTGTGGCT
CGCTTTGAAG CGGAAGCGTT AGAAGTAGCA AAGAAAAAAT TTGGCGACCA TGTCAAAATT
CAACAAGACC CAGATGTTCT TGATACTTGG TTTTCATCTA GTTTATGGCC GTTTTCCACA
TTGGGCTGGC CGGAAAATAC TCCAGACTTA GAAAAATATT ATCCTACTAG CACTCTTTCT
ACTGGTTTTG ATATCATCTT TTTTTGGGTA GCTAGAATGA CAATGATGGG AGTACATTTG
ACTGGAAAAA TGCCATTTGA AACTGTTTAT ATTCACGGTT TAATGTTAGA TGAAAACGGT
AAAAAACAAT CTAAATCTGC TGGAAATGGT ATTAACCCAT TATTATTAAT TGAAAAGTAT
GGTACCGATG CTTTACGTTA CACTTTGATG CGAGAAACTG CTGGAGCAGG ACAAGATGTG
AGGATGGATT ATAATAGAGA AACTGATGAG TCTGCATCAG TAGAAGCTTC TCGAAATTTT
ACTAATAAAA TTTGGAATGC TGCTAGGTTT GTCATGATGA AATTAGAGGG TAAAACTCCT
GAAGAATTAG GGAAACCAGA GGTAGATAAA TTAGAATTAG TTGACCGTTG GATTTTGTCT
CACTTCTATC AGACTGTGCA ACAAACTTGC GATTATTTAG ATAATTATGG TTTGGGAGAA
GCTGCTAAAG GTCTTTATGA ATTTATTTGG GGATATTTTT GTGATTGGTA TCTTGAATTA
GTTAAGTCTC GTTTACAGGG TGAAGATGAA AATTCTCGGT TGGTGGCACA GCAAACTTTA
GCTTATGTTT TGGATGGAAT TTTAAGGTTA TTACATCCTT TTATGCCTCA TATTACTGAA
GAAATTTGGC ATACTTTGAA TCAAGTTGGA GAAGAAAATT GTTTGGCTTT ACAGTCTTAT
CCAAAGTTAG ATAAATCTTT AATTAATTCT GATTTGGAGC ATGAGTTTGA GTTATTAATT
GGGGTAATTC GGAGTCTCAG AAATTTACGG GCGGAGGTTG ATATTAAGCC AAAGGTAAAA
ATTACGGCAA TTTTGCAGAG TCAGAATGAA CAGGAACGTG AAATTTTGAG GAAAGGAGAG
AATTATATTC AGGATTTAAT TAAAATTGAA AAGTTGAATA TTACTTCTAG TGTTGATTTA
AAGGTTGGTC AAACTATTGC TGGTGTTATT GGTACTGTAC AAGTTTTAAT TCCATTATCA
GGAGTAGTAG ATATTGAAGC TTTATCTGCT AGACTGAACA AAAAGTTAGA GAAGTTGGAA
AAAGAGATAG GATCTACTAA AAAACGGTTG AGTAAACCAG ATTTTGTGAA GAAGGCAGAC
CCTAAATTTG TGGAGGAAAC TAGAAATAAT TTGGCAGAGG CAGAAAAGCA GGCAGAATTT
TTGCGCGATC GCTTGGATAA GTTCCAGTCA AATTAA
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| Protein sequence | MTRSIPELPT KYDPFVTEAK WQRYWEENNT FKADPKQAGD PYCIVIPPPN VTGSLHAGHA
FNNSLIDALI RYHRMRGDNT LYLPGTDHAS IAVQTILERK LKADGQTRYD VGREKFLKLA
WEWKAESGGT IVNQLRRLGV STDWTRERFT LDEGLSKAVI EAFMRLYEQG LIYRGNYLVN
WCPASQSAVS DLEVENKEVN GNLWHFRYPL TDGSGYVEVA TTRPETMLGD TGVAVNPNDD
RYKDIIGKTV MLPIMKREIP IIADELVDPE FGTGCVKVTP AHDPNDFEMG KRHNLPLINI
MNKDGSLNEN AGVFVEQDRF EARKNVVQRL KEEGVLVKVE DYSHSVPYSD RGKVPVEPLL
STQWFVKIKP LAEKTLELLD RHNQPKFVPE RWTKVYRDWL VKIQDWCISR QLWWGHQIPA
WYVISETNGE IADNTPFVVA RFEAEALEVA KKKFGDHVKI QQDPDVLDTW FSSSLWPFST
LGWPENTPDL EKYYPTSTLS TGFDIIFFWV ARMTMMGVHL TGKMPFETVY IHGLMLDENG
KKQSKSAGNG INPLLLIEKY GTDALRYTLM RETAGAGQDV RMDYNRETDE SASVEASRNF
TNKIWNAARF VMMKLEGKTP EELGKPEVDK LELVDRWILS HFYQTVQQTC DYLDNYGLGE
AAKGLYEFIW GYFCDWYLEL VKSRLQGEDE NSRLVAQQTL AYVLDGILRL LHPFMPHITE
EIWHTLNQVG EENCLALQSY PKLDKSLINS DLEHEFELLI GVIRSLRNLR AEVDIKPKVK
ITAILQSQNE QEREILRKGE NYIQDLIKIE KLNITSSVDL KVGQTIAGVI GTVQVLIPLS
GVVDIEALSA RLNKKLEKLE KEIGSTKKRL SKPDFVKKAD PKFVEETRNN LAEAEKQAEF
LRDRLDKFQS N
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