Gene Tery_3404 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_3404 
Symbol 
ID4244441 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp5213167 
End bp5213691 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content34% 
IMG OID638108388 
Productferric uptake regulator family protein 
Protein accessionYP_722978 
Protein GI113476917 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0735] Fe2+/Zn2+ uptake regulation proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.092554 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.327657 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATTTT ATAATCATGA TTCACTTAAG TCTGAACTAA ATCAAAGAGG TTGGCGTTTA 
ACTGCTCAAA GGGAAACTAT CCTGCAAGTG CTTCAACGTC TACCTCAAGG CAAACACTTA
AGTGCAGAAG AAATATATAA TCTGTTGTTA AATCAAAAGG AACAAATTAG TCTGTCTACT
GTTTATCGAA CACTACATTT ATTGACAAAA GTAGGTATTC TCAGGGAACT AGAACTAGCC
GAAGGACATA AACATTATGA GATGAGTGCC CCCAACCTTA ATAAACATCA CCATTTAGTT
TGTCTTCAAT GTCATAAAAC CTTTGAATTT AATGATGATT CCATAATGAA AATTAGTCAG
AAGCAGGCTG AAAAAGAAGG TGTTGAAATG TTAGACTGTC AACTAACAAT TCATGCTATT
TGTATTGAGG CTTTACGCAA AGGTTGGCCT GCTTTAGTAG CTACTAATTG GTCTTGTCCA
AGAACTAACT TAGAAATAAC ATCTAAATCA AATAATCACA AATAA
 
Protein sequence
MAFYNHDSLK SELNQRGWRL TAQRETILQV LQRLPQGKHL SAEEIYNLLL NQKEQISLST 
VYRTLHLLTK VGILRELELA EGHKHYEMSA PNLNKHHHLV CLQCHKTFEF NDDSIMKISQ
KQAEKEGVEM LDCQLTIHAI CIEALRKGWP ALVATNWSCP RTNLEITSKS NNHK