| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_3398 |
|---|
| Symbol | |
|---|
| ID | 4244435 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Trichodesmium erythraeum IMS101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008312 |
|---|
| Strand | - |
|---|
| Start bp | 5204319 |
|---|
| End bp | 5205416 |
|---|
| Gene Length | 1098 bp |
|---|
| Protein Length | 365 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 638108382 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_722972 |
|---|
| Protein GI | 113476911 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.15413 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.22081 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAAACTGA ATCAAAATCA TAAACCAGAT AAAGAATTAA ATGAAAGCCT TTTTCTAATA
ACTGCTAAAC AAAACTGCGC TGATTTTGAT TTCTTAATTG ATTATCTGAA TAATCATCAA
GACGAAGTCG AGTCTGCTCT AAAAAATTAT GGTGCTGTAG CTATTAGGGG ATATGAAGTA
AAAACTCCTG AGCAGTTTCA ACAGGTAGGA TTGAGGATTT TTCCTGAGCT GCAAAATCAA
TATCCTGGTG GGGCACCTCG TCATCAAATT ACTGAATATG TCTGGACTGC TTCTGAATTA
CCAAGTTATC TAACAATTTC TGGTCATACA GAATTGTCTA ACTCCCCATC AAACCAACCT
CATTATATAT TGTTTTTTTG CCCTCAAGTT GCTAAAAGTG GCGGTGAAAC TCCAGTTATT
GATATGAAAT CGGTTTTATC AGATTTACCT GAACAGTTAC AGCAGAAGTG TTCCCATACC
CGTTTGGTAA CAAAGTTTTA TTGGGTAAAT ACACAGAAAA GATTATTTGA CGTACGATTA
TGGAAATGGC CTTGGTTTCG TTTTCCTAAA TCTTGGAAGG CTGTATTTAA CACTGAGGAT
AAAAGTTTAG TTGAGGCGAA ATGCTTTGAG ACAGGACGAC AGACTGAGTG GCTTATTAAT
GATGATTTAA TTTCTTGTTG TCCAATGGAG ATAGTTACCT CTCATCCTAT GACCTCAGAA
ACTCTCTGGA ATGGATGGTT CCCTCGGTTT CATATATGGG GTACTTCTAT TGAAGCGTGG
TTTGTTGCTA AGTCCCAAGG ATCATTCAGG AGTTGGTTGG TATTTTTCCT CTTATTTTTG
ATCACGTTTT TGCAAATTTG TGTCGAAAAA ATTATTCCAC AACAGCGCAA ATATCGATAT
TTGGATGTAG TGTTTGAAGA TGGTTCCGAT TTATCTTTTT GGGATGTTTA TCATATTGTT
AAGAGTTACT GGAAAAATGC AGAATTATTT TCCTGGCAGG AGGGAGATAT TGTAATTTTA
GATAACTATC GTATGGGGCA TGGTAGGCTA CCTTTTACCG GAAAAAGAAA AGTTTATATA
GCCTTCTCTT CACTCTAG
|
|---|
| Protein sequence | MKLNQNHKPD KELNESLFLI TAKQNCADFD FLIDYLNNHQ DEVESALKNY GAVAIRGYEV
KTPEQFQQVG LRIFPELQNQ YPGGAPRHQI TEYVWTASEL PSYLTISGHT ELSNSPSNQP
HYILFFCPQV AKSGGETPVI DMKSVLSDLP EQLQQKCSHT RLVTKFYWVN TQKRLFDVRL
WKWPWFRFPK SWKAVFNTED KSLVEAKCFE TGRQTEWLIN DDLISCCPME IVTSHPMTSE
TLWNGWFPRF HIWGTSIEAW FVAKSQGSFR SWLVFFLLFL ITFLQICVEK IIPQQRKYRY
LDVVFEDGSD LSFWDVYHIV KSYWKNAELF SWQEGDIVIL DNYRMGHGRL PFTGKRKVYI
AFSSL
|
|---|
| |