Gene Tery_3390 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_3390 
Symbol 
ID4244427 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp5193904 
End bp5195148 
Gene Length1245 bp 
Protein Length414 aa 
Translation table11 
GC content37% 
IMG OID638108374 
Producthypothetical protein 
Protein accessionYP_722964 
Protein GI113476903 
COG category[S] Function unknown 
COG ID[COG4398] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.658448 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0973611 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGTGGT CAAACTCTCT ATCAACCCGT CCTTCATTAG AAGCAGCAGT TAAGGAAGTA 
GTAGAAAAAA GTTCAGAATC ATTAGGAACT AAAGCAGATT TAGGACTGGT ATTTATCTCA
TCAGCTTTTA CCAGTGAATA TCCACGGCTA ATGCCTCTAC TGAAAAAACA TCTACCAGAA
ACTATTACGA TAGGCTGCGG TGGAGGTGGT ATTGTTGGTA TGAATGAGCA AGGAAAACCG
CAAGAACTAG AGCAAAAAAC TGCAATTAGC CTCAGTTTAG CACATTTACC AGAAGTTGCA
GTAAAAGCTT TTCATATATC AGCAGGACAG CTACCAGATT TAGATAGTTC CCCAGATCGT
TGGTGTAATC TTATTGGAGT ACCAACTGTA GACAAACCTC AATTTATTAT ACTTGCCGAT
CCATTTTCTG CTAAAATAAA TGACTTACTT CAAGGACTAG ATTATGCTTA TCCTCATTCT
CCTAAGGTGG GAGGATTAGC TAGTAACGGA ATAAATGGCC AAAATGCAGG ACTCTTTTGT
GAAAATAATC TCTACCAAGA AGGAGCTGTA GGTGTTTCTT TATCTGGTAA TATAATATTA
GAAACAATAG TAGCTCAGGG CTGTCGCCCT GTTGGTCAAC CTTATAGAGT TACACAAGGA
GAACGTAATA TAGTTTTAGA ACTTGAAGAG TTAGTTAGTT CTAATCAAAT AGTTAGTGAT
GGTGTTAAAC AGTCTCCATT AGAAGCATTA CAAAATTTAG TACAAAATCT TGATGAAAAA
GACCGCAAGC TAGCCGAAAA CTCCCTATTT GTTGGTATAG TTAGGGACGA ATTTAAACAA
AACTTGGAAC AAGGAGACTT TTTAATTCGT AATTTAATTG GGGTAGACCC TAAAGCGGGA
GCGATCGCTA TCGGAGATCA AGTTAGGACA GGCCAAAGAA TTCAATTTCA TTTACGGGAT
GCTCATACTT CAGCAGAAGA TTTAGAAATG TTACTACAAC GTTATCAAAG AAAGGTTGGT
TTTCAAAGTA CAGCTACAAA CAATGCTACT GCTTTAATGT TCTCTTGTTT GGGACGTGGA
GAAGTACTAT ATGGTAAACC TAACTTTGAT TCTAGCTTAT TTAGTAGTTA TTTAAATATC
CCTATCAGTG GTTTTTTTTG TAATGGTGAA ATTGGACCTG TAGGTAGTAG TACATTTTTA
CATGGTTATA CCTCTGTATT TGGTATTTGC CGTCAACTTT CTTGA
 
Protein sequence
MRWSNSLSTR PSLEAAVKEV VEKSSESLGT KADLGLVFIS SAFTSEYPRL MPLLKKHLPE 
TITIGCGGGG IVGMNEQGKP QELEQKTAIS LSLAHLPEVA VKAFHISAGQ LPDLDSSPDR
WCNLIGVPTV DKPQFIILAD PFSAKINDLL QGLDYAYPHS PKVGGLASNG INGQNAGLFC
ENNLYQEGAV GVSLSGNIIL ETIVAQGCRP VGQPYRVTQG ERNIVLELEE LVSSNQIVSD
GVKQSPLEAL QNLVQNLDEK DRKLAENSLF VGIVRDEFKQ NLEQGDFLIR NLIGVDPKAG
AIAIGDQVRT GQRIQFHLRD AHTSAEDLEM LLQRYQRKVG FQSTATNNAT ALMFSCLGRG
EVLYGKPNFD SSLFSSYLNI PISGFFCNGE IGPVGSSTFL HGYTSVFGIC RQLS