| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_3380 |
|---|
| Symbol | |
|---|
| ID | 4243475 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Trichodesmium erythraeum IMS101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008312 |
|---|
| Strand | + |
|---|
| Start bp | 5181207 |
|---|
| End bp | 5183684 |
|---|
| Gene Length | 2478 bp |
|---|
| Protein Length | 825 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 638108364 |
|---|
| Product | ATPase AAA-2 |
|---|
| Protein accession | YP_722954 |
|---|
| Protein GI | 113476893 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.802803 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTTGAAC GTTTTACAGA ACAATCAATC AAAGTAATTA TGTTAGCTCA GGAAGAGGCC
CGTCGCTTAG GGCATAACTT TGTGGGAACA GAGCAAATTC TTCTGGGGTT AATTGGTGAA
GGTACAGGTA TTGCCTCTAA AGTACTGAAG GAAAATGGTG TAAATCTCAA AGATGCTCGG
AACGAAGTAG AAAAAATTAT TGGCCGTGGT TCTGGGTTTA CTCCAGCAGA AATTCCTTTT
ACTCCCAGAG TAAAAAGGAT GTTAGAAATT TCTCTAGAAG AAGCGAGGAA ATTAGACCAT
AATTATATTG GCACAGAACA TTTGCTACTG GGATTACTAC AAGATTCTGA AGGAGTAGCT
GCTAAAGTAT TGGACAACTT GGGAGTTGAT AAAGGTAAAA TTCGGACTCA AGTAATTCGC
TCCCTGGGAG AAGTTGCTGC TGTTGCTCCT GGGGGTTCTA CCCCTAGTGG TAAGAAAGCT
GTTACTCTAG AAGAGTTTGG TACAGACTTA ACAAAATTAG CAGCAGAGGG TAAGATAGAT
CCAATAGTAG GCCGAAAAAC TGAAATTGAA CGAGTGATAC AAGTCTTAGG CCGTAGGACA
AAAAATAATC CTGTTCTTAT TGGTGAACCT GGAGTAGGAA AAACAGCTCT TGCTGAGGGA
TTAGCTCAAC GGATCATTAA TCAAGATGTT CCCGATATCC TAGAAAATAA ACAGGTGGTT
AGTCTCAATA TTGGTTCTCT GATAGCTGGT ACTAGGTTTA GAGGAGAATT TGAGGAAAGA
TTGAAAAAAA TAATGGATGA AATTCGTGCT AATGGTAACA TTATTTTGGT AATTGATGAA
ATTCACACTG TTGTAGGTGC TGGTGCTATT GAGGGTAGCA TGGATGCTGC TAATATTCTC
AAACCTGCTT TGGCAAGGGG TGAGTTACAA TGTATTGGAG CGACTACCCT AGATGAATAT
CGCAAGCATA TTGAAAGAGA TGCTGCTCTC GAACGTCGTT TCCAACCAGT GAAAGTCGGT
GAACCCAGTG TAGAACAGAC TATTGAAATT CTTTATGGGG TACGCTCTGC TTATGAACAA
CACCACAGGT TAACTATTTC TGATGAGGCT CTTAGAGCTG CAGCTCAGTT ATCTGATCGC
TATATTAGTG ACCGCTTCTT ACCAGATAAA GCTATTGACC TTATTGACGA AGCTGGTTCC
CGTGTTAGAG TGAAAAATTC TATGGTTTCA CCACAGTTAA GGGAACTAAG ACGAGAGCTT
TCTAGAGTGA TAAAAGACAA AGAAGAAACT GTTCGTCAAC AAGATTTTGA AAAAGCTAGT
CAACTGCGCG ATCGTGAACT AGGCATTCAA GCAGAGATTG AAGAAACTAC CTCTAACAAA
CAAGACAAAA AAAACAGTAA GTCTCCTGTA GTGACTGAAG ACGATATTGC TGATATTGTC
GCATCTTGGA CTGGAGTCCC TGTGAGTAAG TTGACAGAAT CAGAGTCTGA GAAACTATTA
CATATAGAAG ATACTTTGCA TCAACGCCTT ATTGGTCAAG AAGATGCAGT GAAAGCTGTT
TCCCGTGCTT TACGTCGGGC TCGTGTTGGT TTGAAGAACC CTAAGCGACC TATTGCTAGT
TTTATTTTCT CTGGTCCGAC TGGTGTTGGG AAAACAGAAC TGACAAAAGC ATTAGCTGCT
TATTTCTTTG GTTCTGAAGA GGCGATGATT AGGTTAGATA TGTCAGAATA TATGGAACGT
CATACCGTTT CTAAACTTGT TGGTTCTCCT CCAGGATTTG TAGGTTATGA TGAAGGTGGG
CAATTAACGG AAGCTGTACG TCGTCGTCCG TACACTGTAG TTTTGTTTGA TGAGATTGAA
AAGGCTCATC CAGATGTATT TAATATTATG CTGCAAGTTC TCGAGGATGG TCGTTTAACT
GACTCTAAGG GTCGAGTAGT AGATTTTAAG AATACCTTAA TCATTATGAC TTCTAATATC
GGTTCTCAAG TGATTGAGAA AGGTGGCGGT GGTTTAGGGT TTGAGTTTGC TGAGGATAAA
GAAGAAGCTC AATATAATCG TATTCGTAAT TTGGTTAATG AGGAACTGAA ACAATATTTT
CGCCCAGAAT TTCTAAACCG TTTGGATGAA ATTATTGTTT TCCGTCAGTT GACTAAGGAT
GAGGTTAAAG AGATTGCAGA AATTATGCTA CGGGAGGTAT TTAGTCGTTT AGGGGATCGT
GAAATTACTC TGACAGTCAG CGATAAGTTT AAAGATCGTT TGATAGAAGA TGGATTCGAT
CCTAGTTACG GAGCTAGACC TCTACGTCGA GCTATTATGC GTTTGTTAGA AGATGTTTTG
GCAGAAGCGT TATTAGCTGG TAAGATTCAG GATGGGGAAA ATGTTTATGT AGATTTAGAT
GAAAACCGTG AGGTAAAAGT TACACCTATT GGCAATTCTG AAAAACAACT CCCGGAGTTT
GCTTACAGCA ATAATTAA
|
|---|
| Protein sequence | MFERFTEQSI KVIMLAQEEA RRLGHNFVGT EQILLGLIGE GTGIASKVLK ENGVNLKDAR
NEVEKIIGRG SGFTPAEIPF TPRVKRMLEI SLEEARKLDH NYIGTEHLLL GLLQDSEGVA
AKVLDNLGVD KGKIRTQVIR SLGEVAAVAP GGSTPSGKKA VTLEEFGTDL TKLAAEGKID
PIVGRKTEIE RVIQVLGRRT KNNPVLIGEP GVGKTALAEG LAQRIINQDV PDILENKQVV
SLNIGSLIAG TRFRGEFEER LKKIMDEIRA NGNIILVIDE IHTVVGAGAI EGSMDAANIL
KPALARGELQ CIGATTLDEY RKHIERDAAL ERRFQPVKVG EPSVEQTIEI LYGVRSAYEQ
HHRLTISDEA LRAAAQLSDR YISDRFLPDK AIDLIDEAGS RVRVKNSMVS PQLRELRREL
SRVIKDKEET VRQQDFEKAS QLRDRELGIQ AEIEETTSNK QDKKNSKSPV VTEDDIADIV
ASWTGVPVSK LTESESEKLL HIEDTLHQRL IGQEDAVKAV SRALRRARVG LKNPKRPIAS
FIFSGPTGVG KTELTKALAA YFFGSEEAMI RLDMSEYMER HTVSKLVGSP PGFVGYDEGG
QLTEAVRRRP YTVVLFDEIE KAHPDVFNIM LQVLEDGRLT DSKGRVVDFK NTLIIMTSNI
GSQVIEKGGG GLGFEFAEDK EEAQYNRIRN LVNEELKQYF RPEFLNRLDE IIVFRQLTKD
EVKEIAEIML REVFSRLGDR EITLTVSDKF KDRLIEDGFD PSYGARPLRR AIMRLLEDVL
AEALLAGKIQ DGENVYVDLD ENREVKVTPI GNSEKQLPEF AYSNN
|
|---|
| |