Gene Tery_3376 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_3376 
Symbolpgk 
ID4243471 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp5175033 
End bp5176229 
Gene Length1197 bp 
Protein Length398 aa 
Translation table11 
GC content40% 
IMG OID638108361 
Productphosphoglycerate kinase 
Protein accessionYP_722951 
Protein GI113476890 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0126] 3-phosphoglycerate kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.404913 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACAAAAA AAACTGTAGC AAGTTTATCA AAATCTGACT TATCTGGCAA AAAGGTACTT 
ATGCGGGCTG ATTTTAATGT ACCTGTTGAT AATGGTAGTA TTACAGACGA TACTAGAATT
CGGGCAGCTC TTCCCACAAT TCAAGATTTA ACTGAGAAAG GTGCAAAAGT TATCTTGACT
AGTCATTTTG GACGGCCAAA GGGAAAGGTT AATGAAAAGA TGCGTCTGAC TCTTGTGGGG
GAGAGACTCT CTGAAGTATT GGGTAAAGAA GTTAAAAAGT GTGACGACTG CATTGGTGAT
GAAGTAACTT CTACTGTGGC GGAAATGAAA GATGGTGATG TAGTTTTGCT AGAAAATGTT
CGCTTCTACT CTGGAGAGGA GGGGAATGAT CCAGAGTTTG CCAAACAACT TGCTTCTGTG
GCAGATTTAT ATGTGAATGA TGCTTTTGGA ACTGCTCATC GTGCTCATGC TTCGACTGAG
GGCGTGACTA AATATTTGAG TCCTTCTGTT GCTGGTTATT TAATTGAACA GGAACTAAAA
TTCCTCCAAG GTGCAATTGA TAGTCCTCAA AAACCTTTAG CTGCAATTAT TGGTGGTTCT
AAGGTTTCTA GTAAAATTGG TGTAATAGAA GCTTTGTTGG ATAAGTGTGA TAAGTTGCTC
TTGGGTGGTG GTATGATTTT CACTTTCTAC AAAGCTCGTG GTTTAAGTGT GGGTAAGTCT
CTGGTTGAGG AAGATAAGAT AGAATTGGCA AAGTCTTTGG AAGCTAAGGC AAAAGAGAAA
GGTGTAACAA TGTTGTTACC TACTGATGTG GTTGTAGCTG ATAAGTTTGA CCCAGAGGCG
AATACTCAAA CTGTTAGTAT TGAAGCTATT CCGGATGGTT GGATGGGTTT GGATATCGGA
CCTGAGTCTG CAAAGGTTTT TCAAGATGCT TTAGCAGACT GTAAAACTGT AATTTGGAAT
GGTCCGATGG GGGTATTTGA GATGGAGAAA TTTGCTAAAG GTACTGAAGC GATCGCTCAG
ACTCTTGCTG ATAAGCAGGA TGCTATTACT ATTATTGGTG GTGGTGACTC TGTTGCTGCG
GTGGAGCAGT TAGGTTTGGG TGAAAAAATG AGTCACATTT CTACTGGTGG TGGTGCTAGT
TTGGAATTGT TGGAAGGTAA GAAGTTACCT GGTATTGTTG CTTTAGATGA TCAATAA
 
Protein sequence
MTKKTVASLS KSDLSGKKVL MRADFNVPVD NGSITDDTRI RAALPTIQDL TEKGAKVILT 
SHFGRPKGKV NEKMRLTLVG ERLSEVLGKE VKKCDDCIGD EVTSTVAEMK DGDVVLLENV
RFYSGEEGND PEFAKQLASV ADLYVNDAFG TAHRAHASTE GVTKYLSPSV AGYLIEQELK
FLQGAIDSPQ KPLAAIIGGS KVSSKIGVIE ALLDKCDKLL LGGGMIFTFY KARGLSVGKS
LVEEDKIELA KSLEAKAKEK GVTMLLPTDV VVADKFDPEA NTQTVSIEAI PDGWMGLDIG
PESAKVFQDA LADCKTVIWN GPMGVFEMEK FAKGTEAIAQ TLADKQDAIT IIGGGDSVAA
VEQLGLGEKM SHISTGGGAS LELLEGKKLP GIVALDDQ