Gene Tery_3360 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_3360 
Symbol 
ID4243455 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp5158360 
End bp5158881 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content39% 
IMG OID638108345 
Productnitrogen-fixing NifU-like 
Protein accessionYP_722935 
Protein GI113476874 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0694] Thioredoxin-like proteins and domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.595792 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCAAG CTAAAATTCC TTTGCCAGAG TCTGTGAGTC TAGAAGCTCT GGTCTCTGAT 
ATTACCCACT TTGAACAGAC GATCGCTCAT TGGGATGAAA ATCAAAAGTT AGTAGTTGAG
GGATTGAAAA ATGCTATTGA AGCATTACAC AAAGAAGCTT TGACTAGATT AATTCGTAGT
GTGAAAAAAG AATCTATGCC AGCACTGCGT GAAGCGGTGC AAGATGAGGT AGTTTATGGT
TTATTGCGTT ACCACGAATT AGTTAAACCA CCCACACCAC CTTTAGAAAT TAGGATTCAA
CAAGCATTGG ATGAAGTTCG CCCAGGTTTG CAAAGCCATA ATGGTGATGT GGAGTTAGTT
GGGATAAAAT TGCCCGATAC CGTAGAGGTC AAGTTAGTGG GAAATTGTAG TAACTGTCCT
GCTTCCACAT TAACCATGAA AGACGGTGTG GAACAAGCTA TTAAAACCCA TTGCCCAGAA
ATTAAAAATG TAGTTTCTGT ACATATTTCT GGCATTAGTT AA
 
Protein sequence
MTQAKIPLPE SVSLEALVSD ITHFEQTIAH WDENQKLVVE GLKNAIEALH KEALTRLIRS 
VKKESMPALR EAVQDEVVYG LLRYHELVKP PTPPLEIRIQ QALDEVRPGL QSHNGDVELV
GIKLPDTVEV KLVGNCSNCP ASTLTMKDGV EQAIKTHCPE IKNVVSVHIS GIS