Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_3318 |
Symbol | lpxC |
ID | 4243489 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | + |
Start bp | 5092619 |
End bp | 5093524 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 638108303 |
Product | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase |
Protein accession | YP_722894 |
Protein GI | 113476833 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0774] UDP-3-O-acyl-N-acetylglucosamine deacetylase |
TIGRFAM ID | [TIGR00325] UDP-3-0-acyl N-acetylglucosamine deacetylase |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATATGA ATTATCAATA TACTTTAGGA GGGGAATTTT CGCGGTCGGG AGTGGGTTTA CATAGTGGTA TAAAATCTCA TGTTAAAATT ATGTCTGCTC CTCAAAATAC AGGCAGATAT TTTGTTAGAA TTGACTTACC TAATTATCCA GTAATTCCAG CTATAGTTTC TTCTGTTATT TCTACTACTC TCTCTACAGA ACTAGGTACT AGAGATATTC GTATCCGTAC TGTAGAACAT CTATTAGCTG CTTTGGCAGG AATGGGTATA GATAATGCTC GAATAGAAAT TGATAGCCCT GAAATTCCCT TGTTAGATGG TTCAGCTAAA GTCTGGACAG AGGCGATCGC TTCTATAGGA TTAGTAAAAG CAAAGGGGGT AGATGAGGAG GTTGGGAAAT GGAGAGATGA AACTATAGAA ATTAATAATA CTCACCTCCA ACAACTCAAA GCCCATAAAC TACCTGTGAT TTCTCAACCA GTCTGGATAT ATCAGGGGGA TAGTTTTGTT GCTGCTTTAC CGAGTCTTGA AACTCGCTTT ACTTATGGGA TAGATTTTGA TTTACCAGCG ATCGGTAATC AATGGTATAG TTGGTCTCCA CAAACAGAAA GTTTCACTGA TTCTATTGCC CCGGCTCGGA CATTTGGTTT ATCATATCAG ATTGACCAAT TGCGAGAAGC TGGTTTGATC AAAGGTGGTA GTTTAGATAA TGCTCTAGTT TGTAGTGAAA CTGGATGGTT AAATCCACCC TTAAGATTTA CAAATGAACC AGTGCGTCAT AAAATTTTAG ATTTAATTGG AGATTTGAGT TTACTGGGAA GTTTTCCTCA GGCTCATTAT TTTGCTTACA AAGCTAGTCA TAAGTTGCAT ATCCAGTTAG CTCAAAAAAT TTTAGAGTTA AACTAA
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Protein sequence | MNMNYQYTLG GEFSRSGVGL HSGIKSHVKI MSAPQNTGRY FVRIDLPNYP VIPAIVSSVI STTLSTELGT RDIRIRTVEH LLAALAGMGI DNARIEIDSP EIPLLDGSAK VWTEAIASIG LVKAKGVDEE VGKWRDETIE INNTHLQQLK AHKLPVISQP VWIYQGDSFV AALPSLETRF TYGIDFDLPA IGNQWYSWSP QTESFTDSIA PARTFGLSYQ IDQLREAGLI KGGSLDNALV CSETGWLNPP LRFTNEPVRH KILDLIGDLS LLGSFPQAHY FAYKASHKLH IQLAQKILEL N
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