| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_3253 |
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| Symbol | |
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| ID | 4243674 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Trichodesmium erythraeum IMS101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008312 |
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| Strand | + |
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| Start bp | 4989560 |
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| End bp | 4991563 |
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| Gene Length | 2004 bp |
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| Protein Length | 667 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 638108249 |
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| Product | FtsH peptidase |
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| Protein accession | YP_722840 |
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| Protein GI | 113476779 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0465] ATP-dependent Zn proteases |
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| TIGRFAM ID | [TIGR01241] ATP-dependent metalloprotease FtsH |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.586375 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAATT TTGGGCAACA AATTAAAACT GATGAGCTAA AGGGAATTAA TCACCATAAC
TGGTCATTAT GCCAAGCTCA ATCCAATACT CAAAAGGCTA AAATTCTTTT TGGTAGAATT
CCTGGTGGAA AATTAACCAG AAAATTAGGG TGGAAAATTT TGGCTACTGG GATAATTGCT
CAAGCAGTAT TATTAGTAAG TCCAGCTTTT GCTAACAGTA CGCAAAAAAA TCTTAGCTAT
AGTCAGCTAT TAGACAAAAT TCAAGCTGGA GAAGTAACAG AAATAGATTA CTATCCCTCT
CGTGGAATTG CTAAGGTTAG CTTGAAAGGG CAAAGGAGCA GGGAGGGAAT GTATATAGTT
CAGATGTTTG AGCATGTCCC AGAACTACTT GATCAGGTTC GTGCTCAAAA AATTGACTTT
GAATTAAAGC GCTCTCCTGA CAATAGCGTT GCTATGGGGA TCATATTTAA TATTCTTATC
GTTTTTGTGG TCATTGTTGT ACTATTGGCA ATTTTGCGTC GTTCTAGTCA GTCTCAGGGA
AATGCGTTGA ACTTTGGTAA GTCTAGGGCA CGTTTTCAGA TGGAGGCTAA AACAGGGGTA
TTATTTGAAG ATGTAGCAGG TATTGAGGAA GCAAAGGAGG AACTTCAGGA AGTTGTCAGT
TTCTTGAAAA AGCCAGAGAA GTTTACAGCT ATTGGGGCTA AAATTCCTAA AGGTGTATTG
TTGGTAGGGC CACCAGGGAC TGGTAAGACT CTATTGGCAA AGGCGATCGC AGGTGAAGCA
GGGGTTCCTT TTTTTAGTAT TTCTGGTTCA GAATTTGTGG AAATGTTTGT GGGTGTGGGA
GCTTCTCGTG TACGAGATTT GTTTAAAAAA GCTAAGGAAA ATGCTCCTTG CATTATATTT
ATAGATGAAA TAGATGCGGT AGGTAGACAA AGAGGTGCTG GTATTGGTGG GGGTAATGAT
GAACGAGAGC AAACTCTTAA CCAACTACTA ACTGAAATGG ATGGTTTTGA GGGTAATAGT
GGAATTATCA TTATTGCTGC GACTAACCGA CCTGATGTTT TGGATGTTGC TTTATTACGT
CCAGGTAGGT TTGATAGACA GGTGACTGTA GATTTGCCTG CTTATAAAGG GCGTTTGGGC
ATTTTGGAAG TTCATGCTCG CAATAAGAAG TTAACTCCAG AGATATCCCT AGAGGCGATC
GCTAGAAAGA CACCTGGTTT TTCGGGAGCA GACTTAGCTA ATATGTTGAA TGAGGCTGCT
ATTCTAACTG CTAGACGACG TAAAGAAGGA ATTACACCTA ATGAAATTGA TGATGCTATT
GACCGAGTGA CTATTGGTTT GAGTCTCACC CCATTATTGG ATGGTAAGAA AAAACGGTTA
ATTGCTTATC ATGAATTAGG TCACGCTTTG TTGATGACTC TACTGAAAAA TTCTGACCTT
CTTAATAAGG TGACTATTAT TCCTCGTTCT GGTGGAGTTG GTGGTTTTGC TCAACCAATT
ATGGATGAAG GAATGATTGA TAGTGGAATG TATACCCGTG GTTGGTTAAT AGACAGGATT
ACAATTTCTC TAGGAGGACG TGCTGCTGAG GAGGAGATTT TTGGTTTAGC GGAAGTTACG
GTGGGAGCGG CCAATGATAT TCGGAGTGTG GCCAGTTTAG CTCGTGAGAT GGTAACTCGC
TATGGAATGT CTGACTTAGG GCCTTTGGCT TTGGAAAATC CAAATGGGGA AGTTTTTTTG
GGCCGAGGTT GGCAGTCCCA GCAGCCAGAA TATTCTGAGG AAGTTGCTAT TAAAATTGAC
CATCAAATAC GAACAATGGT TTTTCATTGT TATGAAAAAG CTCGAAAAAT TATCAGAGAA
AATCGTGTTT TGATGGATAG GTTAGTAGAT TTATTAATAG AAAAAGAGAC TATTGAGGGT
GATGAATTTC GCAGAATAGT TTCAGAATAT ACGGAGTTAC CGAAAAAACA AAAGTCTCTT
ATTAATTTGG AAAAGAAAAT TTGA
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| Protein sequence | MKNFGQQIKT DELKGINHHN WSLCQAQSNT QKAKILFGRI PGGKLTRKLG WKILATGIIA
QAVLLVSPAF ANSTQKNLSY SQLLDKIQAG EVTEIDYYPS RGIAKVSLKG QRSREGMYIV
QMFEHVPELL DQVRAQKIDF ELKRSPDNSV AMGIIFNILI VFVVIVVLLA ILRRSSQSQG
NALNFGKSRA RFQMEAKTGV LFEDVAGIEE AKEELQEVVS FLKKPEKFTA IGAKIPKGVL
LVGPPGTGKT LLAKAIAGEA GVPFFSISGS EFVEMFVGVG ASRVRDLFKK AKENAPCIIF
IDEIDAVGRQ RGAGIGGGND EREQTLNQLL TEMDGFEGNS GIIIIAATNR PDVLDVALLR
PGRFDRQVTV DLPAYKGRLG ILEVHARNKK LTPEISLEAI ARKTPGFSGA DLANMLNEAA
ILTARRRKEG ITPNEIDDAI DRVTIGLSLT PLLDGKKKRL IAYHELGHAL LMTLLKNSDL
LNKVTIIPRS GGVGGFAQPI MDEGMIDSGM YTRGWLIDRI TISLGGRAAE EEIFGLAEVT
VGAANDIRSV ASLAREMVTR YGMSDLGPLA LENPNGEVFL GRGWQSQQPE YSEEVAIKID
HQIRTMVFHC YEKARKIIRE NRVLMDRLVD LLIEKETIEG DEFRRIVSEY TELPKKQKSL
INLEKKI
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