| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_3218 |
|---|
| Symbol | |
|---|
| ID | 4243813 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Trichodesmium erythraeum IMS101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008312 |
|---|
| Strand | - |
|---|
| Start bp | 4924188 |
|---|
| End bp | 4925303 |
|---|
| Gene Length | 1116 bp |
|---|
| Protein Length | 371 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 638108218 |
|---|
| Product | periplasmic solute binding protein |
|---|
| Protein accession | YP_722809 |
|---|
| Protein GI | 113476748 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0803] ABC-type metal ion transport system, periplasmic component/surface adhesin |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0863891 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.580114 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATTA GTAGATATCT GTTCCAAATT AATTTAACTA ATAATGCAGT GAGAAAAGGC
TTCACTCGGA ACAGGAAACA GGAAATATAT CTGAGTGGTA AATACACAAA TAATTTGGCC
TACCTGCTTA ATATTTCTAC TCAAGATTTG AAAAATACAA TTTGGTCAAT GTTAGGAATT
TTATTAGGAT TATGGATAAG TGGTTGTGCT GCCCCATCTT CAAATATTTC CCCTGAGAGT
GAGAATAAAC TCTTAGTAGT CTCTACAAGT ACGATCATTG CTGATATGAC AGAAAAAATA
GGTGGAGATG AAATTGAGCA TCAGGGAATT ATTAAACCAG GGGCTGACCC TCATATTTAT
GAACCTGTTC CTACTGATAG TGTGGCTTTT GAGAAAGCAG ATTTAATTAT TTATAATGGC
TATAATTTGG AACCTACTTT AATTAAACTT ATGAATGCTG CGGGTATAAA GGCTCAAAAG
TTGGCGGTGG GGGAAAAGGT GAAGCCTTTA CAAAATTTGG GTAAGGGGGA GTTAGTGCCA
GATCCTCATG TTTGGGGTGA TGCGGAAAAT GGAATTGTAA TGGTGAAAGG TATTCGGGAT
GCTTTAATTG AGTTGTCACC GGAAGATAAA GAGGTGTTTA TGGAAAATGC TGCCAAATTA
GTTGAGGAGT TAGGGCAGGT TGATATTTGG ATCATGGAAC AAATAGGAAC TATTCCGGAA
GGTCAGCGCC GACTGGTGAC TACCCATGAT GCTTTTGAGT ATTATGCGAA AGCTTATGGT
TTAGAGATGA CTGGAACTTT GATTGGGATG AGTACGGAGG AGCAACCTAG TGCGCAGACT
GTAAAAAATT TGGTGAAGGA AATTAAGAAA AGTGGAGTAC CTGCTATTTT TGCGGAGACT
ACTATTAATC CTAAGTTGAT TACTACGGTA GCTCAGGAAG CTGGGGTACG GTTAGCTCCT
AGGGAGTTAT ATTCTGATTC TATTGGGGCT CCAGGGAGTG AGGGAGATAG TTATACGAAA
ATGTTGGTGT CTAATACTCA GGCAATAGTT GAAGCTTTGG GTGGGGAATA TACAGCTTTT
GAGTTACAAA TAACTGGAAC TTTAGAAAAA AATTAA
|
|---|
| Protein sequence | MKISRYLFQI NLTNNAVRKG FTRNRKQEIY LSGKYTNNLA YLLNISTQDL KNTIWSMLGI
LLGLWISGCA APSSNISPES ENKLLVVSTS TIIADMTEKI GGDEIEHQGI IKPGADPHIY
EPVPTDSVAF EKADLIIYNG YNLEPTLIKL MNAAGIKAQK LAVGEKVKPL QNLGKGELVP
DPHVWGDAEN GIVMVKGIRD ALIELSPEDK EVFMENAAKL VEELGQVDIW IMEQIGTIPE
GQRRLVTTHD AFEYYAKAYG LEMTGTLIGM STEEQPSAQT VKNLVKEIKK SGVPAIFAET
TINPKLITTV AQEAGVRLAP RELYSDSIGA PGSEGDSYTK MLVSNTQAIV EALGGEYTAF
ELQITGTLEK N
|
|---|
| |