Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_3163 |
Symbol | ppnK |
ID | 4243834 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | + |
Start bp | 4830526 |
End bp | 4831443 |
Gene Length | 918 bp |
Protein Length | 305 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 638108172 |
Product | inorganic polyphosphate/ATP-NAD kinase |
Protein accession | YP_722764 |
Protein GI | 113476703 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0061] Predicted sugar kinase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.00750441 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | GTGTCTAAAA TAGGAATTAT TTATAACGAT GCTAAACCTA TAGCTTGTCG CATAACTAAT GAATTGAAAG ACAAGCTGAA GGCTTATGGC TATGATGTTC ATCTCGTCAT TGGGGCCGAG GGAATTTTAG GTTATCCTAA TCTAGAACGC CCTGTATGCC ATACTCCTAT AGACCAGCTA GTTCCCTCTG GTTTTACAAA AGATATGAAA TTTGCCATTG TTTTAGGAGG AGATGGTACT GTTCTATCCG CATTTCGTCA AGCTGCACCC TCCCAGATTC CACTATTAAC TGTCAATACA GGCCACATGG GTTTCTTAAC TGAAACTTTT GTCAATCATT TGTACCCAGC TATTGAACAG ATTCTAGCAG GAAACTATGA AATAGAAGAG CGGACTATGC TAGAAGTACG TCTGTTCCGA AATGATAAGT TATTCTGGGA AGCTCTCTGC TTAAATGAAA TGGTTTTGCA TCGGGAACCG ATGACTTGTA TGTGCCATTT TGAAATTAAA ATTGGTAAAC ACGCTCCCAT AGATATTGCT GCTGATGGTA TTATTATATC TACTCCCACT GGTTCTACTG CTTATTCTTT ATCCGCAGGT GGCCCTGTTA TCACTCCAGG AGTTCCAGTT TTAGAGCTCT CACCTATTTG TCCCCATTCT CTTGCATCCC GCGCTTTAGT TTTTGCTGAT ACTGAACCTA TAACTGTTTT GCCAGCAGGT CCAAATCGTC TAATGATGGT TGTAGATGGT AATGGAGGAT GTTATGTTCT TCCAGAGGAT AGTATACAAG TCAAACAATC TCAGTATAAA GCACGTTTTA TTCGACTTAA AACACCGGAG TTTTTTCACA TTCTTCGGGA GAAATTGGGG TGGGGACTAC CACATATTGC CAAGCCAACT TCTGTGGAAC TGCCATGA
|
Protein sequence | MSKIGIIYND AKPIACRITN ELKDKLKAYG YDVHLVIGAE GILGYPNLER PVCHTPIDQL VPSGFTKDMK FAIVLGGDGT VLSAFRQAAP SQIPLLTVNT GHMGFLTETF VNHLYPAIEQ ILAGNYEIEE RTMLEVRLFR NDKLFWEALC LNEMVLHREP MTCMCHFEIK IGKHAPIDIA ADGIIISTPT GSTAYSLSAG GPVITPGVPV LELSPICPHS LASRALVFAD TEPITVLPAG PNRLMMVVDG NGGCYVLPED SIQVKQSQYK ARFIRLKTPE FFHILREKLG WGLPHIAKPT SVELP
|
| |