Gene Tery_3102 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_3102 
Symbol 
ID4244193 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp4752782 
End bp4753627 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content42% 
IMG OID638108115 
Productphytanoyl-CoA dioxygenase 
Protein accessionYP_722708 
Protein GI113476647 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG5285] Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGACCG TTGGATATTC TGAGCAGCAT AGCACTAGCC ACACTCAATT TAATCAAGTT 
GAGGAGAAGG TCGCTTTCTT CGAGAAAGAA GGTTTTGTTG GCCCATTTGA TCTAGGTCAA
ACTGCTAGTT TAGTTGCTGT ACGTGATGCC ATGAGTAAAG AGATAGAAGC ATCTCAAGGC
CAACATATTT CTAGTCAGCC TACTCAAAGT CCGATTATGG ATCGCCGGAT CGCTCATACG
ACTTCTAAGT TAATTTATAG CCTCTCTACA GAATCCCCAA TTTTGGATGA TGTTGCCGAT
TTTATTGGCT CAAATATTCT GTTTTGGATG GCAGAAACAA TTGTTAGAGA GCCAGGTCAT
GATGGTCATA TTGTGGAAAA GACTGGTCAA ATTTGGCATA TAGATGTGAT TAATGGGTGG
ATTAAAGGGG TTCATACTTC TATTGCTGTC ACTGATATGA CGATGAAAAC TGGTTGTCTC
CTTGTTATCC CCGGAACTCA CAAATATGAT GCTGATCTTC GTGCTTTGGA AAAAGCAGGA
GAGTGTAATC TCACTGATGC TGAGAGTCTT CTCAGGTTAG CTGATAAGAT GCACCCAGAA
AACGCACCTC ATCAAATTAA AGCTATCGAA ATGAAAGCCG GTCAATACTG CTTTACAAGA
GGCGGTATTT GGCATGGTGT TAGTCAAAAT AATGACTCTC GAACCCGCTT TGGTGTTGTG
GCTCGGTTTG CCAGACCCGA TGTTGAAATA AAAAATTTCG CAGGCAATCC TATTCCTTGC
ATTATAGTAC GGGGTGAAGA CTCTCACCAA CTCAATCTCC TGAAAAACAT ACCAGAACAA
CACTAG
 
Protein sequence
MQTVGYSEQH STSHTQFNQV EEKVAFFEKE GFVGPFDLGQ TASLVAVRDA MSKEIEASQG 
QHISSQPTQS PIMDRRIAHT TSKLIYSLST ESPILDDVAD FIGSNILFWM AETIVREPGH
DGHIVEKTGQ IWHIDVINGW IKGVHTSIAV TDMTMKTGCL LVIPGTHKYD ADLRALEKAG
ECNLTDAESL LRLADKMHPE NAPHQIKAIE MKAGQYCFTR GGIWHGVSQN NDSRTRFGVV
ARFARPDVEI KNFAGNPIPC IIVRGEDSHQ LNLLKNIPEQ H