Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_3102 |
Symbol | |
ID | 4244193 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | + |
Start bp | 4752782 |
End bp | 4753627 |
Gene Length | 846 bp |
Protein Length | 281 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 638108115 |
Product | phytanoyl-CoA dioxygenase |
Protein accession | YP_722708 |
Protein GI | 113476647 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG5285] Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCAGACCG TTGGATATTC TGAGCAGCAT AGCACTAGCC ACACTCAATT TAATCAAGTT GAGGAGAAGG TCGCTTTCTT CGAGAAAGAA GGTTTTGTTG GCCCATTTGA TCTAGGTCAA ACTGCTAGTT TAGTTGCTGT ACGTGATGCC ATGAGTAAAG AGATAGAAGC ATCTCAAGGC CAACATATTT CTAGTCAGCC TACTCAAAGT CCGATTATGG ATCGCCGGAT CGCTCATACG ACTTCTAAGT TAATTTATAG CCTCTCTACA GAATCCCCAA TTTTGGATGA TGTTGCCGAT TTTATTGGCT CAAATATTCT GTTTTGGATG GCAGAAACAA TTGTTAGAGA GCCAGGTCAT GATGGTCATA TTGTGGAAAA GACTGGTCAA ATTTGGCATA TAGATGTGAT TAATGGGTGG ATTAAAGGGG TTCATACTTC TATTGCTGTC ACTGATATGA CGATGAAAAC TGGTTGTCTC CTTGTTATCC CCGGAACTCA CAAATATGAT GCTGATCTTC GTGCTTTGGA AAAAGCAGGA GAGTGTAATC TCACTGATGC TGAGAGTCTT CTCAGGTTAG CTGATAAGAT GCACCCAGAA AACGCACCTC ATCAAATTAA AGCTATCGAA ATGAAAGCCG GTCAATACTG CTTTACAAGA GGCGGTATTT GGCATGGTGT TAGTCAAAAT AATGACTCTC GAACCCGCTT TGGTGTTGTG GCTCGGTTTG CCAGACCCGA TGTTGAAATA AAAAATTTCG CAGGCAATCC TATTCCTTGC ATTATAGTAC GGGGTGAAGA CTCTCACCAA CTCAATCTCC TGAAAAACAT ACCAGAACAA CACTAG
|
Protein sequence | MQTVGYSEQH STSHTQFNQV EEKVAFFEKE GFVGPFDLGQ TASLVAVRDA MSKEIEASQG QHISSQPTQS PIMDRRIAHT TSKLIYSLST ESPILDDVAD FIGSNILFWM AETIVREPGH DGHIVEKTGQ IWHIDVINGW IKGVHTSIAV TDMTMKTGCL LVIPGTHKYD ADLRALEKAG ECNLTDAESL LRLADKMHPE NAPHQIKAIE MKAGQYCFTR GGIWHGVSQN NDSRTRFGVV ARFARPDVEI KNFAGNPIPC IIVRGEDSHQ LNLLKNIPEQ H
|
| |