Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_3084 |
Symbol | |
ID | 4244175 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | + |
Start bp | 4740245 |
End bp | 4740814 |
Gene Length | 570 bp |
Protein Length | 189 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 638108102 |
Product | phage integrase |
Protein accession | YP_722695 |
Protein GI | 113476634 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGTTCAAT TACCTGAAAA GTGCTGTAAA CAAATACTCC AGTCGCCAAA TACTAATCAT TTTCAGGGAA AAAGGGACTA CGCAATATTA AGACTACTTT GGGATAACGC CTTACGCCGG AGTGAAGTAG TAGCCATTGA TATAGGAGAT ATAAGCTTAA GCGATCGTAC TATTTGGATA AAAGGTAAAG GTACACAGGA TAAAGAACGT ATCACCATTA ACCATAGAAC AGTTGCAGCA TTAAAAGATT ATTTATCAAT TAGAAAAGGT GGCATAAACG ACCTATTATT TATCAGTCTT AGTTCTGCTA ATTGGGGTAA CAGATTGGCT GATGATACTG TGTACAACTT AGTAAAACGC ACTTGTTCCG AACTAGGAAT AGACAAACCC ATGTCGCCAC ATAAAATCAG ACATTCTGCC ATTACTCATT TTCTAGACAA ATCTGATGGA GACATTAGAA AAGTACAACA ATATTCTCGT CATAAAAATG TGCAGACAGT TTTAGTCTAT GACGACAATA GAAAAGACTA TCAAGAACAA ATGACTGATC TTATGGGAGA AGATTTTTAG
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Protein sequence | MVQLPEKCCK QILQSPNTNH FQGKRDYAIL RLLWDNALRR SEVVAIDIGD ISLSDRTIWI KGKGTQDKER ITINHRTVAA LKDYLSIRKG GINDLLFISL SSANWGNRLA DDTVYNLVKR TCSELGIDKP MSPHKIRHSA ITHFLDKSDG DIRKVQQYSR HKNVQTVLVY DDNRKDYQEQ MTDLMGEDF
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