Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_3075 |
Symbol | |
ID | 4244725 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | + |
Start bp | 4731692 |
End bp | 4734034 |
Gene Length | 2343 bp |
Protein Length | 780 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 638108097 |
Product | TPR repeat-containing protein |
Protein accession | YP_722690 |
Protein GI | 113476629 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
TIGRFAM ID | [TIGR03032] conserved hypothetical protein TIGR03032 |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATAATG AAACTGATAC TCCTGTTAAT ACCGACAATT ATTTATTAAG AAGCGTACAT ACAAACAATT TCCCTAAAAT TTTAGATCAG CTAGGCATAT CTTTAGTTGT TTCTACTTAT CAAGCAGGTA AATTAATTGT ATTGCGTGCC GATAATGGAG TAATTAATAC TCACTTTCGA GCCTTTAAGA AACCTATGGG ATTAGCAGTA ACTAACGAAA AAATTGCTCT GGGAACTGCT TATAAAATTT GGGATTTTCG TAACGTTCCA GCAGTAGCAG AGAAAATAGA ACCCCAAGGG AAATATGATG CTTGTTATTT ACCAAGAAAT ATTCATATAA CTGGAGATAT TGATATCCAC GAAATGGCTT GGGTGAAAGA TGAATTATGG TTTATTAATA CTCGTTTTTC TTGCCTTTGT ACTCTCGGTC ATCCTAATAG TTTTGTGCCC AGATGGCGAC CTCCTTTTGT CACTGGATAT GACTTAACAG ACCGGTGTCA TTTAAATGGA TTTTGTTTAA AAAATGACCT ACCAAAATAT GTCACAGCTT TAGGAGAAAC TGATACTGCT GCTGGTTGGA GAAAGAATAA AGCTAATGGG GGAATATTAA TAGATATAGA AACAAATGAA GTATTAATTC GGAACTTATC TATGCCTCAT TCTCCTAGAT GGTATCAAGA ACAATTATGG TTATTAGAGT CTGGTAATGG TAGTCTGGCA AAAGTTGATT TAAACCAGAG AAAATTACGA ACAATTGCTA AATTACCAGG GTTTACTCGC GGTATAGATT TTTGGGGAAA TTTAGCATTT ATTGGTTTGT CTCAAGTTCG AGAAACTGCT GTTTTTACGG GTATGCCTAT TACTGAACTT CAAGAAAGAA TTTGTGGGGT TTGGGTGGTA AATATTTTAA CTGGAGAAAC TATCGCTTTT TTAAGATTTG AAGCTGGAGT TCAAGAAATT TTTTCTGTGG CAGTTTTGCC TAATATTCGC TTCCCAGAAA TTATTGAATG GGATGAAAAT TTATTAGCAA ATTCCTATGT TTTACCTGAT GAAGCTTTAG CAGAAACAAT CAAAACAACT GTAGAAATAG CTATGGCAGA AACTCATTTA CTTAAAGGAA ATAAATTATA TCAAAAAGGT GAATTAGTAG AAGCGATCGC TGCATATCAA GAATGTTTGA AGTTACAACC AGATTTGACA ATAGCGAAAT ATAATTTGGG AGTTGCTTTA GGAGATAATC AACAATATGA AGCAGCAATT AATGTTTTAG AACAGGTAAT TAATACAGAA CCAGATAATG CCGATGTTCA AAATAGTATT GCTTATGCTT ATAGTCAAAA AGGTGAATTA CACAAAGCAA TTAAACATTA CGAAAAAGCA ATTTATCTCA ACGGTAATTT TGCCAAAGCA CATTTTAATT TAGGCATAAC TTTGTTAAAA AATGGAGATT TAAAACGAGG ATTTGCAGAA TGTGAATGGC GCTGGCAAAC AGGACAATTT ACACCCTTTC AATGTCCTCA TCCACGATGG AAAGGGGAAG ATATTAGCAA TAAAATTTTA TTAATTCATA CTGAGCAAGG AGCAGGAGAT GCTATTCAAT TTATCCGTTA TGTTCCTTTA GCAGCAAAAC TTTGTCAAGG TATTATATTG GTCTGTCTAC CAGAGTTAAT TCCTCTATTT AAAAATATCC CAGAGATTGA TAAATTAATG CCACCAGGAG AACTAAAATT ATCAGAGTTT GATATCTATG TACCCTTAAT GAGTTTACCC TATATTTTCG GCACAACTTT AGAAACAATT CCTGCCAATA TTCCCTATCT TCAATCTACA AATAGCAACC CCATAAATCT TACTAATACT CAATATAAAG TAGGCATTGT TTGGAGTGGT AGTTCTACTC ATAAAAATGA TGGTAATCGT TCTTGCAAAA TCACAGACTT TTTACCTATT TTACAGGTAC CAGGAGTCAA ATTTTATAGT CTACAAAAAG GAGAAAATAG GCAAGAATTA ACTCAAGTTC CCAGTAATAT TCAGATAGAA GATTTAAGTT ATCAGTTAAA CAATTATGCT GATACAGCAG CAGTAATAGA GCAACTAGAT TTAGTAATTA CTGTTGATAC TTCTGTGGCA CATTTAGCAG GAGCATTAGG TAAAAATGTA TGGAATTTAT TATGTTTTAA TCCGGACTGG CGTTGGTTAC AAGAAGTTGA AGATACTCTT TGGTATCCAA CCATGAAATT ATTCCGTCAG TCTCAGTCAA GAAAGTGGCA AGAAGTTATT GAAAAAGTTC AGGAACATTT GTGGAAAATT ATCACAGGAA ACATGATTAT TAGTAATAAG TAA
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Protein sequence | MNNETDTPVN TDNYLLRSVH TNNFPKILDQ LGISLVVSTY QAGKLIVLRA DNGVINTHFR AFKKPMGLAV TNEKIALGTA YKIWDFRNVP AVAEKIEPQG KYDACYLPRN IHITGDIDIH EMAWVKDELW FINTRFSCLC TLGHPNSFVP RWRPPFVTGY DLTDRCHLNG FCLKNDLPKY VTALGETDTA AGWRKNKANG GILIDIETNE VLIRNLSMPH SPRWYQEQLW LLESGNGSLA KVDLNQRKLR TIAKLPGFTR GIDFWGNLAF IGLSQVRETA VFTGMPITEL QERICGVWVV NILTGETIAF LRFEAGVQEI FSVAVLPNIR FPEIIEWDEN LLANSYVLPD EALAETIKTT VEIAMAETHL LKGNKLYQKG ELVEAIAAYQ ECLKLQPDLT IAKYNLGVAL GDNQQYEAAI NVLEQVINTE PDNADVQNSI AYAYSQKGEL HKAIKHYEKA IYLNGNFAKA HFNLGITLLK NGDLKRGFAE CEWRWQTGQF TPFQCPHPRW KGEDISNKIL LIHTEQGAGD AIQFIRYVPL AAKLCQGIIL VCLPELIPLF KNIPEIDKLM PPGELKLSEF DIYVPLMSLP YIFGTTLETI PANIPYLQST NSNPINLTNT QYKVGIVWSG SSTHKNDGNR SCKITDFLPI LQVPGVKFYS LQKGENRQEL TQVPSNIQIE DLSYQLNNYA DTAAVIEQLD LVITVDTSVA HLAGALGKNV WNLLCFNPDW RWLQEVEDTL WYPTMKLFRQ SQSRKWQEVI EKVQEHLWKI ITGNMIISNK
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