| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_3031 |
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| Symbol | |
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| ID | 4244915 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Trichodesmium erythraeum IMS101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008312 |
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| Strand | + |
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| Start bp | 4679856 |
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| End bp | 4681199 |
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| Gene Length | 1344 bp |
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| Protein Length | 447 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 638108062 |
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| Product | TRAP dicarboxylate transporter, DctM subunit |
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| Protein accession | YP_722655 |
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| Protein GI | 113476594 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG4664] TRAP-type mannitol/chloroaromatic compound transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.542337 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.0000310655 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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| |
Sequence |
| Gene sequence | ATGAGTCTGA GTTTTGAATC TGAATTACTA GGTCCATCAA TGTTTGTCGG AGCATTGATT
TTGCTTTCCC TCGGTTATCC GGTAGCTTTT TCCCTAGGAG GAGTAGCAAT AATCTTTGGT
TTAATAGGTA TTGGTTTAGG AGTTTTTGAC CCTATATTTC TTACCGCAAT GCCCCAAAGA
ATTTTTGGCA TTATGGCTAA CTATACTTTG TTAGCTATTC CCTACTTTAT TTTTATGGGG
GGAATGTTAG AAAAATCTGG CATTGCAGAA CAACTACTGG AAACAATAGG AATATTGTTT
GGTCGAGTTA GAGGTGGTTT AGCTCTGGCA GTTGTTCTTG TCGGCGCTCT TCTAGCTGCT
ACTACTGGTG TTGTTGCTGC TACGGTAGTC GCAATGGGGT TAATTTCTTT ACCTATTATG
TTGCGCTATG GGTATAATAA AGAGTTAGCT ACAGGTGTAA TTGTAGCATC GGGAACTTTA
GGCCAGATTA TTCCCCCTAG TGTGGTTTTA GTAGTTTTGG CAGACCAACT GGGAATTTCT
GTTGGTGATC TATTTATTGG TTCTATTTTG CCTGGTCTAA TAATGGCAGG AACTTTTGCT
CTTCATGTTT TGATTGTTTC TTTTATACGA CCAGATTTAG CACCTGCTTT ACCAGCAGAG
GTACGAAATA TTGGAGGGAA AAATCTCTGG ATGAGGGTGC TAACCGTAAT GTTTCCACCA
TTAATCTTAA TTTTATTAGT TTTAGGTAGT ATATTTTTTG GTATTGCTAC ACCTACAGAA
GCTGGTGCTG TGGGATGTGT GGGAGCGATC GCTCTTGCTA TAGCTAAAGG TAAGTTTAGT
TGGACCTCTT TAAGAAAAGT ATGTGATGTT ACCCTCCGCA CAACTACTAT GGTAATGTTT
ATACTTTTGG GTTCCACTGC GTTTAGTTTA GTTTTTCGAG GAGTCGAAGG CGATCGCTTT
ATGTTTGATT TGCTTTTTAA TCTTCCTGGT GGTACGACTG GTTTTTTGAT TGTCAGTATG
GCAATTGTTT TTTTTCTTGG TTTTTTTATT GACTTTTTTG AGATTGCTTT TATTGTTGTA
CCTTTATTTG TACCTGTTGC ACAACAACTT GGTATTGACC TAGTTTGGTA TGGTGTGATC
TTAGGGGCTA ATCTTCAAGC ATCTTTTTTA ACGCCTCCCT TTGGCTTTGC CCTATTTTAC
TTACGAGGTG TAGCACCTTC AGAAGTTACT ACTGGTCAAA TATATAGAGG TGCTATTCAG
TTCATCTTAC TTCAGTTATT GGTTTTAGTA CTGATTATTA CTTTTCCTAG TATTGTTAAT
TTTCTACCCT CATTGAGTGG ATAA
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| Protein sequence | MSLSFESELL GPSMFVGALI LLSLGYPVAF SLGGVAIIFG LIGIGLGVFD PIFLTAMPQR
IFGIMANYTL LAIPYFIFMG GMLEKSGIAE QLLETIGILF GRVRGGLALA VVLVGALLAA
TTGVVAATVV AMGLISLPIM LRYGYNKELA TGVIVASGTL GQIIPPSVVL VVLADQLGIS
VGDLFIGSIL PGLIMAGTFA LHVLIVSFIR PDLAPALPAE VRNIGGKNLW MRVLTVMFPP
LILILLVLGS IFFGIATPTE AGAVGCVGAI ALAIAKGKFS WTSLRKVCDV TLRTTTMVMF
ILLGSTAFSL VFRGVEGDRF MFDLLFNLPG GTTGFLIVSM AIVFFLGFFI DFFEIAFIVV
PLFVPVAQQL GIDLVWYGVI LGANLQASFL TPPFGFALFY LRGVAPSEVT TGQIYRGAIQ
FILLQLLVLV LIITFPSIVN FLPSLSG
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